Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00766 ATGGCTATCCTCCTGGTTGTTCTATGCTTCGTCTTTAACGACCCGAACGCCGCGTTTGCGGTTGGACCGGGCGCTTCCTTCATTCCCAAAGATAACTTTCTCATTGACTGTGGAGCCAACAAGGAACTTGGTGCACTCCCTGATGGAAGACTCTTCCAAACTGATGAACAATCCGAACAGTACTTAGAGGCCAACGATCATCTCGTAGCAGCCGCCACACCGGAGACGAAGGCACCGTCCCCGGTCGATTTAACAGCAAGAGTATTCCTCCAAGAAGCTACTTACATTTTTCAAATGGCAGAGCCAGGATGGCATTGGCTACGCCTCCATTTCTTGCCTGTTAAAAGCAATGACTTTGATCTCTTACAAGCCAAGTTTTCAGTAGTCACTGAAAAATATGTGTTGCTTCACAGCTTCAACATCAATAATGAATCCACATTTGTTCTTAAGGAGTTTCTTCTCAATATCACTGAACCAAAACTGTCAATCACATTCTTCCCATTGAAGAATTCAGCTGCTTTTATCAATGCCATCGAGGTCGTCTCGGCTCCGATGGACTTGATAGCTGATTCGAACATGGAACTGTCTCCGGTCGGGACGATCGAGGGGCTGACGAAATATGCGTTTCAGACATTGTATAGGTTGAACATGGGAGGACCTATAATCACTCCAAGAAATGACACTATTGGGAGGACATGGGAGACAGATGAGATATACAGGACACCAAAAGCAGCTGGTAGGAGTGTCATTGTTGAGACCAATAGCATTAAATATCAAGATGGGTTGGAAGAAATTGGCATGTTAATAGCTCCTCCAAGTGTGTATGCCAGTGCAGTTCAAATGGGAGAAGCTCATACGAGTGTACCAAATTTTAATGTCACATGGAAATTGGAGGCAGATCCTTCATTTGGGTATCTAATTCGCTTCCATTTCTGTGACATTGTAAGCAAAGCACTCAATAATCTGTATTTCAATGTTTATGTAAATGGGAAGCCTGCTATAACCAACTTGGATTTGTCACACAAGCTAGGGAGTTTGGCTACTGCATACTACAAGGATGTTGTGGTTAATGCTTCCTTGATGGTAGAGGGATTGACGGTTCAAATTGGTCCGGCGAACGTCGAAACGGGTGATATGAATGCCATTTTGAATGGCTTAGAGGTACTGAAAATAAGCAATTCTGTTAATAGTTTGGATGGAGAGTTTGGAGTGGATGGTAAGTCTGCAAATGGGAGTAGTCGTGGTACGGTGGCTGCTGTTGGGTTTGCGATGATGTTCGGGGCGTTTGTCGGGCTCGGTGCTATGGTGATGAAATGGCATAAAAGGCCTCAAGATTGGCAGAAGAGGAACAGTTTCTCTTCTTGGTTGCTTCCTGTACATGCTGGGGACTCTAGCTTTATGAGCAAGAGCTCATATGGATCACACAAGACCAACACTGGTTTAGGGCTTGGGAGGCTGTTTAGTTTGGCAGAGCTGCAAGAAGCCACCAAGAACTTTGATCCAAATTCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTATATTGGAGTGATTGATGAAGGGACAAAAGTTGCTGTCAAGAGAGGAAATGCACAATCTGAACAAGGCATTACAGAATTCCAAACTGAAATTCATATGCTTTCCAAGCTCAGACATAGGCATTTGGTTTCTTTGATTGGTTATTGTGATGAAAACTCTGAGATGATCTTGGTTTATGAGTTCATGTCAAATGGTCCATTCAGAGATCACTTGTATGGAAAAGATATGACTCCATTGTCATGGAAGCAAAGGCTAGAGATCTGTATTGGAGCGGCTCGAGGTCTTCATTACCTTCATACAGGAACGGCTCAGGGAATCATTCACCGTGATGTCAAAACAACCAATATTTTGCTCGACGAGAGCTTCACTGCTAAAGTAGCTGATTTCGGGCTATCGAAGGATGCTGCGATGGGGCAGGGACATGTGAGTACTGCAGTGAAGGGAAGTTTTGGATATTTGGATCCAGAGTACTTCAGGAGGCAACAGTTGACAGAGAAATCAGATGTTTATTCGTTTGGAGTTGTTTTGCTTGAGGCTTTGTGTGCAAGGCCAGCAATCAACCCTTCTTTACCAAGAGAGCAAGTGAACTTGGCTGATTGGGCAATGCAGTGTAAGAGAAAAGGGTGTTTGGAGAAGATAATGGATCCTCTTCTAGTTGGAGCCACAAACCCTGAGTCCATGACCAAGCTTGCAGAAGCAGCAGAGAAGTGTCTTGCTGAGCATGGTGTAGATAGGCCAAGCATGGGGGATGTGCTGTGGAATTTGGAGTATGCATTGCAACTTCAAGAATCCTTCTCAGAAGGCAAAGGTGAAGATGAAAGCACGGTCGCAAGTGTGGCAGCTGTTGCCCCCGCGACCGCTGTCGACGCTTCTACAAATGCACCGAACTCGGTCGAGCGCCCTGTCGTGCAGGCAGAACGGAGTAGGCAACCAGTAGAGGTCGAAGACGTCGATGATGACTCGGGAAGTGCAATGTTTGCTCATTTCTCTAATCTCAATGGTAGATGA 2547 45.15 MAILLVVLCFVFNDPNAAFAVGPGASFIPKDNFLIDCGANKELGALPDGRLFQTDEQSEQYLEANDHLVAAATPETKAPSPVDLTARVFLQEATYIFQMAEPGWHWLRLHFLPVKSNDFDLLQAKFSVVTEKYVLLHSFNINNESTFVLKEFLLNITEPKLSITFFPLKNSAAFINAIEVVSAPMDLIADSNMELSPVGTIEGLTKYAFQTLYRLNMGGPIITPRNDTIGRTWETDEIYRTPKAAGRSVIVETNSIKYQDGLEEIGMLIAPPSVYASAVQMGEAHTSVPNFNVTWKLEADPSFGYLIRFHFCDIVSKALNNLYFNVYVNGKPAITNLDLSHKLGSLATAYYKDVVVNASLMVEGLTVQIGPANVETGDMNAILNGLEVLKISNSVNSLDGEFGVDGKSANGSSRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMSKSSYGSHKTNTGLGLGRLFSLAELQEATKNFDPNSIIGVGGFGNVYIGVIDEGTKVAVKRGNAQSEQGITEFQTEIHMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKDMTPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDESFTAKVADFGLSKDAAMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLPREQVNLADWAMQCKRKGCLEKIMDPLLVGATNPESMTKLAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQESFSEGKGEDESTVASVAAVAPATAVDASTNAPNSVERPVVQAERSRQPVEVEDVDDDSGSAMFAHFSNLNGR 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6777947 6780493 + Carg09548-RA Car17g00766 165138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00766 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Car17g00766 848 Pfam Malectin-like domain 35 390 IPR024788 -
Car17g00766 848 Pfam Protein tyrosine and serine/threonine kinase 504 765 IPR001245 GO:0004672|GO:0006468
Car17g00766 848 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Car17g00766 848 ProSiteProfiles Protein kinase domain profile. 499 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00766 848 MobiDBLite consensus disorder prediction 801 836 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00807 Car-Chr9:4886675 Car17g00766 Car-Chr17:6777947 0 dispersed
Car11g00169 Car-Chr11:921605 Car17g00766 Car-Chr17:6777947 2.51E-24 dispersed
Car16g00093 Car-Chr16:575153 Car17g00766 Car-Chr17:6777947 0 dispersed
Car17g00766 Car-Chr17:6777947 Car18g01174 Car-Chr18:11456071 0 dispersed
Car17g00766 Car-Chr17:6777947 Car08g00532 Car-Chr8:3334465 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89482 PF12819 Malectin_like 4.80E-37 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00766 - - csv:101220967 1497.64