Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00774 ATGAGAAAAGAAGAAAATCTCATCAGGGAAAATATTGGAGAATTTCCTGGTAGAATTACACGTGCTCGAGCTGCTGCATTTAGTGCGTCAGGGCAGCTGCCTCCAAAAGTTCCTGCATATCAACAAGAGAGGCGGGCTGCACGAGCTAATTTGAAAAGAGCTGCTTCTGAAGAAAATAGCTGCCCTTCTATTGCTAAATCATCTCGGCCATGTAAGAGGAGGGCCGTGCTTCAGGATGTCAGCAATATTGGCTGTGAACCTTCGTACTCAAAATGTTCTAACGCAGCTAAAATTGAGACCAATAGTTGCAAGCCAACACTCAGAAACCGTATCAAGAAGTCCAAAGGAGCCTCATCAGTTGGTGTGGCTAACTCCAAGGTTCCTCTTGGTCTTAGAACCAAAGGAGCTTCATCAGTTGGTGTGGCGTACTCCAAGCCTCTTGATCTTAGAACACAAGGTGTACAAGCAAATGTGAAATCAAAAGCTAAGTTGAAAGTTGAGCATTCAAGTAATTCTGAAGACCATGAGGCACATCATCGGGTCGGTGGTATAAAGGAAGAGGTCACAAGTGATTTTCGGGATGATAATTGGAGGTCTCAAAGTCCTTCAGAGTCCCAAAATTTTCAAAATAAAGAGAAAGTGTCGCTTATGGGGACTAGAAGCAACCTGAACATTACAGACATTGATTGTAATGACAGAGATACTCAACTGTGCACTGTCTATGCCAATGATATCCATAACAATTTACGCGTTGCTGAGCTAACCAGAAGACCGCGTCCCAATTTCATGGAAACAGTGCAGACTGATATTACCCAAAGCATGCGGGGTATATTGGTTGATTGGCTCGTTGAGGTATCAGAGGAATACAAGTTAGTACCAGATACGCTCTACCTAACTGTATTTTTCATTGATTGGTATCTCTCCCAAAATTTCATCGAGAGACAAAAGCTTCAACTGTTGGGTATCTCTTGCATGTTAATCGCCTCGAAGTATGAAGAAATTTGTGCCCCACGCGTTGAAGACTTTTGTTTCATCACTGACAGCACCTACACAAAAGAGGAGGTATTGAATATGGAAGGTCAAATATTGAAGCATATGGGCTTTCAGCTTTCTGCACCAACTGCAAAATCTTTCCTCAGGAGATACGTTCGAGCTGCACAAACGACATATAAGACCCCTAGTCTTGAACTCGAGTGCCTCGCCAACTATCTCGCCGAATTAACACTGGTTGACTACGGTTTCTTGAACTTTCTTCCCTCAGTTATAGCTGCATCAGCTGTATTTCTTTCGAAATGGACGTTGGATCAGTCGAGTCACCCATGGAATTCAACACTGGAATACTATACCTCATATAAAGCATCAGATCTGAAAAAAACTGTTCTTGCTTTACAAGATTTACAGTTGAACACCAATGGTTGTCCCCTTAGCTCGATTCGCGTCAAGTATCGACAAGAAAAGTTCAAAGGCGTCGCAACTTTGTCTTCCCCGAAATTACTCGACACACTATTCTGA 1512 42.79 MRKEENLIRENIGEFPGRITRARAAAFSASGQLPPKVPAYQQERRAARANLKRAASEENSCPSIAKSSRPCKRRAVLQDVSNIGCEPSYSKCSNAAKIETNSCKPTLRNRIKKSKGASSVGVANSKVPLGLRTKGASSVGVAYSKPLDLRTQGVQANVKSKAKLKVEHSSNSEDHEAHHRVGGIKEEVTSDFRDDNWRSQSPSESQNFQNKEKVSLMGTRSNLNITDIDCNDRDTQLCTVYANDIHNNLRVAELTRRPRPNFMETVQTDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVFFIDWYLSQNFIERQKLQLLGISCMLIASKYEEICAPRVEDFCFITDSTYTKEEVLNMEGQILKHMGFQLSAPTAKSFLRRYVRAAQTTYKTPSLELECLANYLAELTLVDYGFLNFLPSVIAASAVFLSKWTLDQSSHPWNSTLEYYTSYKASDLKKTVLALQDLQLNTNGCPLSSIRVKYRQEKFKGVATLSSPKLLDTLF 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6828462 6832981 + Carg09555-RA Car17g00774 165146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00774 503 Pfam Cyclin, N-terminal domain 244 370 IPR006671 -
Car17g00774 503 MobiDBLite consensus disorder prediction 165 198 - -
Car17g00774 503 Pfam Cyclin, C-terminal domain 373 495 IPR004367 -
Car17g00774 503 Coils Coil 37 57 - -
Car17g00774 503 MobiDBLite consensus disorder prediction 165 210 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00540 Car17g00774 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01296 Car-Chr4:7500349 Car17g00774 Car-Chr17:6828462 2.55E-143 dispersed
Car04g02306 Car-Chr4:18576798 Car17g00774 Car-Chr17:6828462 5.94E-52 dispersed
Car09g00418 Car-Chr9:2316309 Car17g00774 Car-Chr17:6828462 1.26E-136 dispersed
Car12g00532 Car-Chr12:3524768 Car17g00774 Car-Chr17:6828462 4.72E-96 dispersed
Car15g00608 Car-Chr15:3365078 Car17g00774 Car-Chr17:6828462 4.38E-106 dispersed
Car12g00289 Car-Chr12:1889539 Car17g00774 Car-Chr17:6828462 4.15E-111 wgd
Car17g00774 Car-Chr17:6828462 Car08g00540 Car-Chr8:3380090 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00774 K06627 - csv:101222299 903.279