Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00832 ATGGGAGAGAGATTAGGAGGTTGGGCTATGAATCTTCTCACTATTTTACTACCCATGTGGGTTTCCTCTTCCTTGTTCCCAATAATTGATGCCAGACCACAGCTCACTGGGTTTTCAATTTCTAGGACCAGACTCCAATCCATTCCTCTCATTGTGGCCAAAATGGAAGCTCAATCCCCAGGAGCTGCAGATGTTAGAGTAGTTCATCACCAAGATTTGAACAAGAGAATTCTTGTAGCTTTGGTTGTTTCTTCCACACTTCTTGGAGCTATACTGCTGTTCCTTTTGTGTTTTTGGATATATCGTCGTAAAACGTCGAATCTTGATGATGAAAAATGTCGAAAGAATTTGGAGGGTTCGAAAGGGGTGACGTTAAATCCCATCATATCAAGGTTTAACTCACTGAGGTTAGCTAACTTTAAAGGTTCGGTTTCGACGTTCGACTATAAACTGTTGGAAGCTGCTACTGATAGCTTCAGCAAAAACAATGTCTTGGGCCATGGTGGTTCAGGACATGTTTACAAAGCTTGCTTCAATGATAAATTGCTGGCAGCTGTGAAGAGAATCGATAATGGAGGAGCGGATGCTGAAAGGGAATTCGAGAATGAGTTGAGCTGGTTGTGTAAAATTCGACATCAAAACGTAATCAAACTCTTGGGACATTGCATTCATGGCGAAACACGGTTTCTCGTTTACGAGATGATGCATAATGGATCTTTGGAGTCTCAGTTGCACGGACCTTCTCGTGGATCGGCTTTAACTTGGCATCTCCGGATGAAGATTGCTGTCGATGTTGCAAGAGGATTGGAATATCTTCATGAGCATCGAAATCCTCCTGTCGTTCATCGGGATTTGAAATCGTCGAATATCCTTCTCGATTCGGACTTTAACGCCAAGCTCTCTGACTTTGGCCTTGTTGTCAACTTGGGAGCTCAAAACAAAAACATAAAGCTCTCGGGAACGTTGGGTTATGTCGCCCCGGAATACCTTCTAGACGGTAAGCTAACCGATAAGAGCGATGTGTATGCTTTTGGCGTTGTTCTTCTCGAGCTTCTAACAGGGAAAAAGCCTGTCGAGAAGACGGGACCGACTCATTCCCAATCTCTAGTTTCATGGGCGATCCCGCAGCTCAGCGACAGATCAAAGCTACCGAAAATTGTCGATCCCGTGATAAAGGACACGATGGATTTGAAGCACTTATACCAAGTTGCTGCTGTAGCAGTGTTATGTGTACAATCAGAACCGAGCTATCGACCGTTAGTAACTGACGTTCTACATTCCCTCATCCCTCTCGTACCGGTAGAGCTTGGAGGATCTCTAAGAATTACAGAACCTCTGCATCCAAAAATGCGTTCATCGACCCGGTAA 1368 44.37 MGERLGGWAMNLLTILLPMWVSSSLFPIIDARPQLTGFSISRTRLQSIPLIVAKMEAQSPGAADVRVVHHQDLNKRILVALVVSSTLLGAILLFLLCFWIYRRKTSNLDDEKCRKNLEGSKGVTLNPIISRFNSLRLANFKGSVSTFDYKLLEAATDSFSKNNVLGHGGSGHVYKACFNDKLLAAVKRIDNGGADAEREFENELSWLCKIRHQNVIKLLGHCIHGETRFLVYEMMHNGSLESQLHGPSRGSALTWHLRMKIAVDVARGLEYLHEHRNPPVVHRDLKSSNILLDSDFNAKLSDFGLVVNLGAQNKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLTGKKPVEKTGPTHSQSLVSWAIPQLSDRSKLPKIVDPVIKDTMDLKHLYQVAAVAVLCVQSEPSYRPLVTDVLHSLIPLVPVELGGSLRITEPLHPKMRSSTR 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7085636 7088421 + Carg09614-RA Car17g00832 165204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00832 455 Pfam Protein kinase domain 160 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00832 455 Gene3D Transferase(Phosphotransferase) domain 1 235 433 - -
Car17g00832 455 Gene3D Phosphorylase Kinase; domain 1 124 234 - -
Car17g00832 455 SMART serkin_6 159 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00832 455 ProSiteProfiles Protein kinase domain profile. 159 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00832 455 CDD STKc_IRAK 165 431 - -
Car17g00832 455 SUPERFAMILY Protein kinase-like (PK-like) 135 428 IPR011009 -
Car17g00832 455 PANTHER BNAC02G46490D PROTEIN 11 449 - -
Car17g00832 455 PANTHER OS01G0750732 PROTEIN 11 449 - -
Car17g00832 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Car17g00832 455 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00508 Car17g00832 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00308 Car-Chr5:1696918 Car17g00832 Car-Chr17:7085636 9.01E-53 dispersed
Car17g00832 Car-Chr17:7085636 Car11g01583 Car-Chr11:12563543 7.74E-90 dispersed
Car12g00337 Car-Chr12:2131129 Car17g00832 Car-Chr17:7085636 2.54E-161 wgd
Car17g00832 Car-Chr17:7085636 Car08g00508 Car-Chr8:3219050 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89483 PF00069 Pkinase 3.20E-47 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00832 - - bhj:120085274 806.594