Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00833 ATGACCCTATCACTCACTTTCTCTATTCCCATCACCAACCAAGCTCATAGCTCTTCCGCCATTGGAGCACCTCTTCAAGCTTCTTCTTCTTCTTCTTCTTCTCCGACGATCGATCCATGGCCCGACCTCAACAGCGCTATCGTGGCGTCCGACAACGACATTGGGGCTCTTGGGAAGACAAGAATATGGTTGGGGACGTTCGAGACAGCGGAGGACGCAGCCCGAGCTTATGACGAGGCAGCTCGGCTGATGTGCGGTCCAAAGGCACGAACCAACTTCCAATTCAATCCAAACGATCAACAATCGTCATCGTCGTCATCGTCTTCCTCCAAACTTCTCTCCGCCCCGCTGATGGCGAAATTACACAAATGTCATTTAGCCTCACTACAAATCGCCAAAAAACACACTGCCCATAAACAACACCCCGGATTCGAGCCCAACTACGCCGTATACGGCGGCCCTTCCCCGAGCATTTCCCAAACAACCACCCACCGGTGGCGACAAGAAGAAACCCAAATAGAGACCAACAACGACAACAACAACATTCATCATCAACAATGCCTTCAACCACTTGAGGATGATGACATTGAACAAATGATACAAGAGCTATTAGACCTCGGATCATTCGAAATTATTACATGA 642 49.38 MTLSLTFSIPITNQAHSSSAIGAPLQASSSSSSSPTIDPWPDLNSAIVASDNDIGALGKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNDQQSSSSSSSSSKLLSAPLMAKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIETNNDNNNIHHQQCLQPLEDDDIEQMIQELLDLGSFEIIT 213
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 7091802 7092563 - Carg09615-RA Car17g00833 165205
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car17g00833 213 Pfam AP2 domain 58 86 IPR001471 GO:0003700|GO:0006355
Car17g00833 213 ProSiteProfiles AP2/ERF domain profile. 30 94 IPR001471 GO:0003700|GO:0006355
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car08g00507 Car17g00833 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00833 Car-Chr17:7091802 Car05g01210 Car-Chr5:11426074 1.77E-14 dispersed
Car01g00150 Car-Chr1:768968 Car17g00833 Car-Chr17:7091802 8.39E-27 wgd
Car12g00340 Car-Chr12:2145444 Car17g00833 Car-Chr17:7091802 1.53E-33 wgd
Car17g00833 Car-Chr17:7091802 Car08g00507 Car-Chr8:3192328 1.23E-64 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5076 PF00847 AP2 1.80E-05 CL0081 Car TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00833 - - cmo:103499832 212.231