Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car17g00833 | ATGACCCTATCACTCACTTTCTCTATTCCCATCACCAACCAAGCTCATAGCTCTTCCGCCATTGGAGCACCTCTTCAAGCTTCTTCTTCTTCTTCTTCTTCTCCGACGATCGATCCATGGCCCGACCTCAACAGCGCTATCGTGGCGTCCGACAACGACATTGGGGCTCTTGGGAAGACAAGAATATGGTTGGGGACGTTCGAGACAGCGGAGGACGCAGCCCGAGCTTATGACGAGGCAGCTCGGCTGATGTGCGGTCCAAAGGCACGAACCAACTTCCAATTCAATCCAAACGATCAACAATCGTCATCGTCGTCATCGTCTTCCTCCAAACTTCTCTCCGCCCCGCTGATGGCGAAATTACACAAATGTCATTTAGCCTCACTACAAATCGCCAAAAAACACACTGCCCATAAACAACACCCCGGATTCGAGCCCAACTACGCCGTATACGGCGGCCCTTCCCCGAGCATTTCCCAAACAACCACCCACCGGTGGCGACAAGAAGAAACCCAAATAGAGACCAACAACGACAACAACAACATTCATCATCAACAATGCCTTCAACCACTTGAGGATGATGACATTGAACAAATGATACAAGAGCTATTAGACCTCGGATCATTCGAAATTATTACATGA | 642 | 49.38 | MTLSLTFSIPITNQAHSSSAIGAPLQASSSSSSSPTIDPWPDLNSAIVASDNDIGALGKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNDQQSSSSSSSSSKLLSAPLMAKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIETNNDNNNIHHQQCLQPLEDDDIEQMIQELLDLGSFEIIT | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 7091802 | 7092563 | - | Carg09615-RA | Car17g00833 | 165205 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car17g00833 | 213 | Pfam | AP2 domain | 58 | 86 | IPR001471 | GO:0003700|GO:0006355 | |
Car17g00833 | 213 | ProSiteProfiles | AP2/ERF domain profile. | 30 | 94 | IPR001471 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car08g00507 | Car17g00833 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car17g00833 | Car-Chr17:7091802 | Car05g01210 | Car-Chr5:11426074 | 1.77E-14 | dispersed | |
Car01g00150 | Car-Chr1:768968 | Car17g00833 | Car-Chr17:7091802 | 8.39E-27 | wgd | |
Car12g00340 | Car-Chr12:2145444 | Car17g00833 | Car-Chr17:7091802 | 1.53E-33 | wgd | |
Car17g00833 | Car-Chr17:7091802 | Car08g00507 | Car-Chr8:3192328 | 1.23E-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
5076 | PF00847 | AP2 | 1.80E-05 | CL0081 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car17g00833 | - | - | cmo:103499832 | 212.231 |