Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00848 ATGCCGGTCGACGGTTCTTCAACCACCGCCCCCACCGTCTGCGTCACCGGCGCTGGTGGCTTCATTGCCTCATGGATAGTTAAGCTTCTTCTCCAGAAAGGATATATCGTAAGAGGAACCGTCAGAAATCCAGAGGATCCGAAGAACGGCCATTTGAAAGAATTTGAAGGCGCGGCGGAGCGATTCAGTTTGTATAAAGCCGATCTTCTCGATTTCGAGAGCCTTAGGGCGGCGATTAACGGATGCGATGGCGTTTTCCACACGGCGTCGCCTGTAACTGACGATCCGGAGCAAATGGTGGAACCGGCGGTCAACGGCACGAAGAATGTTATAATTGCGGCGGCCGAAGCCAAAGTCCGTCGCGTGGTTTTCACTTCGTCGATTGGTGCAGTCTACATGGACCCCAACCGTGGTCCAGACGAGATCGTAGACGAGTCCTGCTGGAGCGATCTAGAGTTCTGCAAGAACACCAAGAATTGGTATTGCTATGGAAAAGCTGTGGCGGAGCAAGCGGCATGGGAGGTTGCGAAGGAGAAGGAAGTGGACTTGGTGGTGGTGAATCCGGTGCTGGTGCTGGGCCCACTGTTGCAACCCACCATTAATGCCAGCATTATCCACATACTCAAGTACTTGACTGGATCAGCTAAGACGTACGCCAATTCCGTTCAGGCGTACGTCCACGTGAAGGATGTTGCTCTTGCACATATCCTCGTGTACGAGAACCCCTCCGCCTCCGGCCGGTACCTCTGCGCCGAGAGTGTTCTCCACAGAGGGGAGATCGTTGAGATTCTTGCCAAATTGTTCCCGGAATACCCTATTCCCACCAAGTGCTCAGATGAAGTGAACCCAAGGAAGAAGGCATACAAATTCTCAAACCAGAAGCTGAAGGACTTAGGATTGGAGTTCACTCCAGTGAAGCAGTGTCTATATGAAACCGTTAAGAACTTACAGGAGAAAGGTCATCTCCCGATCCCCACTTCTACTCAACCAGCAGACTCCATTCGAATTCAATCTTAA 1017 51.92 MPVDGSSTTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAERFSLYKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVYMDPNRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKEVDLVVVNPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYENPSASGRYLCAESVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGLEFTPVKQCLYETVKNLQEKGHLPIPTSTQPADSIRIQS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7181299 7184766 + Carg18736-RA Car17g00848 165220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00848 338 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00957 Car-Chr14:5843170 Car17g00848 Car-Chr17:7181299 0 dispersed
Car14g00958 Car-Chr14:5872273 Car17g00848 Car-Chr17:7181299 0 dispersed
Car17g00848 Car-Chr17:7181299 Car20g00593 Car-Chr20:3329855 1.39E-74 dispersed
Car18g00944 Car-Chr18:10106464 Car17g00848 Car-Chr17:7181299 2.57E-12 dispersed
Car01g00159 Car-Chr1:804454 Car17g00848 Car-Chr17:7181299 1.03E-138 wgd
Car14g00956 Car-Chr14:5815604 Car17g00848 Car-Chr17:7181299 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00848 K09753 - csv:101213412 615.92