Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00866 ATGGGGACTCCTGTGAATATCGTTGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCTTGGATTGAAGGTCAAGTTACAGGAATCAATGGCAAAAACGCCACCATACTCACTACCAATGAAAAATCCATTGTGGCAGAAATTTCGCGTATATATCCGAAAGACACGGAGGCGCCGCCGGCAGGGGTGGACGACATGACGAAATTAGCGTACCTTCATGAACCGGGAGTTCTGCATAATCTAGCTTGTCGGTTTGCTCTCAATGAGATTTACACATACACCGGGAATATTCTAATTGCGGTGAATCCTTTCCGGAGACTGCCACATTTGTATGATATTCACATGATGGAGCAGTATAAAGGAGCTCCTTTCGGCGAGCTTAGTCCACATCTTTTCGCCGTTGCGGATACTTGCTATAGATCGATGATCAACGAGCAAGGAAGTCAGTCGATATTAGTGAGCGGAGAGAGTGGTGCTGGTAAGACTGAGACAACGAAGATGCTCATGAGATATCTTGCATTCATGGGAGGCAGATCAGACACTGAAGGAAGAACAGTCGAACAACAAGTTCTGGAGTCCAACCCTGTATTGGAAGCATTTGGGAATGCCAAAACTGTTAAAAACAACAACTCAAGTCGTTTTGGTAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGAGCTGCCATTCGTACGTACCTTCTCGAACGGTCTCGTGTTTGCCAAGTCTCGGACCCTGAGAGAAACTACCATTGTTTTTACATGCTGTGTGCTGCACCACCGGAAGATGTCAAGAAATACAAGTTAGGAGATCCAAGGACGTTTCATTATCTCAATCAAACGAATTGTTATGAAGTCGCGAATGTTGATGATTCGAGAGAGTACTTAGAGACGAGAAACGCGATGGATGTCGTCGGAATCAGCGAGGATGAACAGGATGCTATATTTCGTGTTGTAGCTGCAATACTGCATCTAGGAAACATTGACTTCATGAAAGGGAAGGAATTTGACTCCTCCAAAGTCAAAGACGAGAAGTCAAATTACCATCTTGAAACAGCAGCAGAGCTACTCATGTGTGATGCAAAGGCACTGGAGCATTCGCTCTGCCAACGGGTCATCGTGACTCCTGATGGCAACATTACGAAGCCCTTGGACCCCGATGCAGCGGCCTTGAGTCGTGATGCGTTGGCGAAAACCGTGTATTCTAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGCTCAATTGGCCAAGATCCTAATGCAGCCAGCTTAATTGGTGTCCTTGATATCTATGGGTTTGAAAGCTTCAAGATCAACAGTTTTGAGCAGCTCTGTATCAACCTGACCAATGAGAAGTTGCAGCAACATTTTAACCAGAACCAGATACCTGGCCGTGTGCCAACGAGGACGCTGGCCTCCAAAGGGGTGGATTATGAGATTCGACATCAGTTGGAGAGGGGAATGAAGCATTCCTTATCAGAACGTATTTTTAAAACCGTGAGGCTGACGGTGATACGTAACGAGCCAAAGCGAACAATATTTGCTAGCGATTGGCATGGGGTGTTACAAATGATATCAGAGCCAGACACCGGTCGGTGTGCCAGCGAGGACCATGTTTTCAAGATGGAACAAGAGGAGTACACGAAAGAAGAAATAAACTGGAGCTATGTTGAGTTTGTAGATAATCAGGATGTTCTTGATCTTATTGAGAAGAAACCTGGAGGCATAATCGCCCTGCTTGATGAAGCCTGCATGTTTCCAAAGTCAACACATGAAACATTTGCTCAAAAGATGTATCAGACATACAAAGGACATAAGCGATTCAGCAAGCCAAAACTCGCTCGAACCGACTTCACGATCAATCATTATGCCGGAGATGTTACATATCAAGCAGATCACTTTCTAGATAAAAATAAGGACTACGTAGTAGCAGAACATCAGGCTCTTTTGGATGCCTCCAAATGCTCTTTTGTTGCTAATCTTTTCCCACCACTTCCTGAGGAGAGCTCAAAGCAGTCGAAGTTTTCCTCTATTGGTACTCGGTTCAAGCTTTCCCTTTTGGACTTCCCCTCAAGGTTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCTCACCCTTATAACGAATGTTTCGTTCCCTTCTCCAACCGATGTGGGATCTCACAATCCACCCCCTTGGGGACCTAGTGTCCTCTCTGGCACACCACCCGATCAACAACTGCAAGCTCTCATGGAAACATTGAATACTACAGAGCCACATTATATTAGATGTGTAAAGCCCAACACAGTTTTGAAGCCTGGAATCTTTGAGAACTTCAACGTCTTGAACCAGTTGAGATGTGGGGGAGTGCTGGAGGCAATTCGAATAAGCTGTGCAGGATATCCAACCAAAAGAACATTTGACGAGTTCCTCGATCGTTTCGGAATGCTTGCTCCAGATATCTCAGATGGGTCTGATGAAAAATCAGCATGCATTGCAATATGTGACAGAATGAGCTTAAAGGGTTATCAGATTGGGAAAACAAAAGTGTTCCTCAGAGCTGGACAAATGGCTGAGATGGATGCACGACGAACCGAAATACTGGCCAATGCTGTCCGACGCATCCAACGGCAAATCCGAACCCATCTAACTCGAAAAGAGTTCATCGCCCTGAGGAAAGCTACAATTCATATGCAGAAGCTTTGGAGAGGGCAGCTTGCTCGTAAGCTGTATGAAGAACTGAGAAGAGAAGCAGCTTCAATCCGTATACAAAAGCATGCTCGAGCTCACGCAGATAGAAAATCTTACAAAAAGTTACTTGAATCAGCTATAGTTATTCAAACTGGTATGCGTGGAATGAGAGCTAGAAATGAGTACAGACACAGAAGAAGAACCAAGGCAGCTATCATTATTCAGACTGAATGGCGAAGGGTATCAGCTATTTCAGCTTACAAACAGCATCGGATAGCAACTCTTGCTCTTCAATGCCTCTGGCGATCTAAAGTTGCAAGGATGGAGCTAAGAAAATTAAGGATGGCTGCAAGAGAAACAGGGGCACTCAAGGAAGCTAAGGATAAATTGGAGAAGCGTGTCGAGGAGCTAACGTGGCGCCTAGAGTTTGAGAAGCACTTGAGGATGGATGTTGAAGAGGCCAAGGGACAAGAGGTTGCAAAATTACAAAGTACTTTGGAAGAAATGCAAGGGAAGCTGAATGAAGCCAATGCTGCAATCATACGTGAGAGAGAAGCAGCAAAACTGGCTATAGAACAAGCTCCACCAGTCATTAAGGAAGTACCTGTGGTTGATGAGACCAAGCTAGAACTGCTGAGAAACCATAATGAAGAACTTGAGTGGGAGGTTGGAGAGCTGAAGAAGAAAATTGATGAATTTGAAGTAAAGTATGGTGAAGTGGAAATGGAGAGTAAAGCTAGACTTAAGGAGGCTGAAGAGGCACAATTGAAATCATTGCAACTTCAAGAGTCTATTGAGAGATTGGAATCAAATTTATCTAGCCTTGAGTCTGAGAACCAGGTGCTGCGCCAGCAGGCTTTGGTTGCAGCTGACAATGAGTCTCTCTCTGAAGAACTGCAAGCCCTCAAGAGTAAGATTGGAAGTCTAGAGGCAGAGAATGAAGGTCTCCGCAACCGGACGGTGGCTGTCGAGCACATATCTGTTCCTACTAGGGGCCTTGCAGAAAGCAAGGAACCATCTACTGTTCCTGTCCTAGCTAAACAAGGATCACTTACTGAGAAGCAACAGGAAAATCACGACGTCCTGCTCAAATGCTTAGCGGAAGACAAGCGTTTCGACAAGGGCAGACCAGTTGCAGCTTGTATTGTCTACAGGACACTTCTTCAATGGAGATCTTTTGAAGCTGAGAAGACAAATATATTTGACAGAATCATCCACATAATCAGATCTTCTATAGAGAGTCAGGAAAGTACCAGTGATCTTGCATATTGGCTTTCAACCACTTCCACACTTCTCTGTCTTCTTCAAAGTTCACTCAAAGCAACCAATACAAGCACGGGTCTTCGATCATCGTCAGTGGGGTTGGGAGTTTCCAGTGGATACAGTGGAATGGTGGGCAAGACAAACAATCAATCCAAAGTTGAAGCCAAGTACCCAGCGCTGCTTTTCAAGCAACATCTGGCTGCATGCGTTGAAAAACTGTTTGGGATGATACGTGATCATTTGAAGAAAGAAATTAGCCCTTTCTTGCATCTATGTATACAGGCCTTTTGGGAGAAGCCCAAAGCAAAGTCACGAGAGCCTAATGCTCAAAGTGAACAATATCATACCATTGCACCAAGATCAGCTAGGGCCAGATCAATAAGAGGGCCATCTAAAAACATCCATTCAAACATTGTTGCAAAGCAGCAAGCATCAAGTATTCACTGGCAAAGCATTGTTCATAAGCTAAACCAGACATTGGATATAATGTCTGAAAACCATGTTCCCTCCATGATCATCAAAAGCATCTTCTTCCACGTTTTCTCATTCATAAACGTCCAGCTTTTCAATAGCTTGTTGCTACGACGCGAGTGCTGTTCTTTCAGTAATGGAGAGTACTTGAAGCTGGGTTTGCAGGAGTTGGAGCAATGGTGCCACAAAGCTACTGACACGTATGCTGGCTCTTCCTGGGATGAACTTCAACATATCAGACAAGCAGTAGGATTTCTGGTGTTACTTCAGAAGTCACAGAAAAGTTTGAATGAGATCACGGATGAACTATGCCCGATTCTGAGCATCCCGCAAATATATCGCATCGGCACGATGTTCTGGGACGACAAATATGGAACTCAGGGATTATCTACTGATATCATTGGAAAAATGAGAGTCCTTTTAGCAGAAGATTCCATCAACATCCCAAACAACTCTTTCCTTCTTGATGTGGATTCAAGGTACAAACTTACCTTCTATATCCAAAGTTGTTCGAAAGCCAGTCACCGAGCACCCAAAGGGGTGTATTGTGAGATCCCACATCGATTTGAGAGGGGAACAAACATTCTTTATAATGACAATATTGTGAATCTTTACAACGATGAAGCATTACTTATTGATTCTCGTGGCGTAAAAACCATTTTCAGCATCCCATTCTCAATGGAAGAAATATTCCGCTCCTTCGCCGAGGACGGCGGGGTTAACCTGTCCGACGTCGACCCGCCACCACTTATGAGACAAAAATCAGATTTCCATTTTCTTCTGCAGCAGCAAATGAGTGAATGA 5223 44.23 MGTPVNIVVGSHVWVEDPEDAWIEGQVTGINGKNATILTTNEKSIVAEISRIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFALNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAPFGELSPHLFAVADTCYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLGDPRTFHYLNQTNCYEVANVDDSREYLETRNAMDVVGISEDEQDAIFRVVAAILHLGNIDFMKGKEFDSSKVKDEKSNYHLETAAELLMCDAKALEHSLCQRVIVTPDGNITKPLDPDAAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQNQIPGRVPTRTLASKGVDYEIRHQLERGMKHSLSERIFKTVRLTVIRNEPKRTIFASDWHGVLQMISEPDTGRCASEDHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVTYQADHFLDKNKDYVVAEHQALLDASKCSFVANLFPPLPEESSKQSKFSSIGTRFKLSLLDFPSRFFKTRLLGRGFLTLITNVSFPSPTDVGSHNPPPWGPSVLSGTPPDQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGSDEKSACIAICDRMSLKGYQIGKTKVFLRAGQMAEMDARRTEILANAVRRIQRQIRTHLTRKEFIALRKATIHMQKLWRGQLARKLYEELRREAASIRIQKHARAHADRKSYKKLLESAIVIQTGMRGMRARNEYRHRRRTKAAIIIQTEWRRVSAISAYKQHRIATLALQCLWRSKVARMELRKLRMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQSTLEEMQGKLNEANAAIIREREAAKLAIEQAPPVIKEVPVVDETKLELLRNHNEELEWEVGELKKKIDEFEVKYGEVEMESKARLKEAEEAQLKSLQLQESIERLESNLSSLESENQVLRQQALVAADNESLSEELQALKSKIGSLEAENEGLRNRTVAVEHISVPTRGLAESKEPSTVPVLAKQGSLTEKQQENHDVLLKCLAEDKRFDKGRPVAACIVYRTLLQWRSFEAEKTNIFDRIIHIIRSSIESQESTSDLAYWLSTTSTLLCLLQSSLKATNTSTGLRSSSVGLGVSSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACVEKLFGMIRDHLKKEISPFLHLCIQAFWEKPKAKSREPNAQSEQYHTIAPRSARARSIRGPSKNIHSNIVAKQQASSIHWQSIVHKLNQTLDIMSENHVPSMIIKSIFFHVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCHKATDTYAGSSWDELQHIRQAVGFLVLLQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSTDIIGKMRVLLAEDSINIPNNSFLLDVDSRYKLTFYIQSCSKASHRAPKGVYCEIPHRFERGTNILYNDNIVNLYNDEALLIDSRGVKTIFSIPFSMEEIFRSFAEDGGVNLSDVDPPPLMRQKSDFHFLLQQQMSE 1740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7298666 7310028 + Carg18718-RA Car17g00866 165238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00866 1740 ProSiteProfiles IQ motif profile. 937 966 IPR000048 GO:0005515
Car17g00866 1740 Coils Coil 1054 1081 - -
Car17g00866 1740 Pfam Myosin N-terminal SH3-like domain 10 44 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car17g00866 1740 Pfam IQ calmodulin-binding motif 939 958 IPR000048 GO:0005515
Car17g00866 1740 Pfam IQ calmodulin-binding motif 890 909 IPR000048 GO:0005515
Car17g00866 1740 Pfam IQ calmodulin-binding motif 869 886 IPR000048 GO:0005515
Car17g00866 1740 Pfam IQ calmodulin-binding motif 916 935 IPR000048 GO:0005515
Car17g00866 1740 Pfam DIL domain 1492 1595 IPR002710 -
Car17g00866 1740 ProSiteProfiles IQ motif profile. 866 893 IPR000048 GO:0005515
Car17g00866 1740 ProSiteProfiles Dilute domain profile. 1297 1616 IPR002710 -
Car17g00866 1740 Coils Coil 1008 1042 - -
Car17g00866 1740 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car17g00866 1740 ProSiteProfiles IQ motif profile. 914 940 IPR000048 GO:0005515
Car17g00866 1740 Pfam Myosin head (motor domain) 542 680 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car17g00866 1740 Pfam Myosin head (motor domain) 743 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car17g00866 1740 Pfam Myosin head (motor domain) 64 465 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car17g00866 1740 Coils Coil 1104 1180 - -
Car17g00866 1740 ProSiteProfiles IQ motif profile. 985 1014 IPR000048 GO:0005515
Car17g00866 1740 ProSiteProfiles IQ motif profile. 889 918 IPR000048 GO:0005515
Car17g00866 1740 Coils Coil 1187 1214 - -
Car17g00866 1740 ProSiteProfiles Myosin motor domain profile. 62 863 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00481 Car17g00866 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00866 Car-Chr17:7298666 Car10g00670 Car-Chr10:3442085 3.80E-07 dispersed
Car14g00622 Car-Chr14:3489519 Car17g00866 Car-Chr17:7298666 1.24E-13 transposed
Car17g00866 Car-Chr17:7298666 Car08g00481 Car-Chr8:3048381 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00866 K10357 - csv:101207221 1644.02