Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00909 ATGGCTATGGCTGGGCGTATCCGATCGATCATCCCTGTATTCAATCAGATTCTGAAATCGGAGTCACGGACTCAGAGACCTGCTCTTCAAAGAGCCCTACTTTGCCCCACGACTGCCAACTCCGAGTTCTCGAGGAACTATGCAACTGCTTCCAGTAAAAGTGAGGTCAAAGTTAAGGTTCCTCTGTCTTTGTTTGGGGGGTCTGGAAACTATGCCTCTGCTTTGTACATTGCAGCAGTAAAAGCTAATTCCTTGGATAAGGTTGAGACAGAGCTTTTTGACCTTGTTGAGGCTTCACAGAGAAGTGCCACCTTTTCTCAGTTCATGAGAGATCCCTCTGTCCCTGCACATACTAGGGTCAAGGCTATTACTGATATTTGCACAGCTGCTAAATTTTCAGAAGTTACAAAAAACTTTTTGGTTGTACTGTCTGAATATGGAAGGCTGAAATACATAGACAGCATTGCAACGAAGTTTCAGGAGTTGACAATGGCTCATAGAGGAGAGGTGAAGGCCATTGTGACTACAGTTATTCCCCTCCCTGCTGAAGAAGAGAAAGAACTGAAAGAGACCCTGCAGGATATTATCGGACAGGGGAAAAAGGTCATCCTTGAACAGAAGATTGATCCAAGTATTCTCGGCGGGCTAGTCGTAGAATTTAACGAAAAACTGTTGGACGTGTCCATTAAGACCAGAGCAGAACAGATGGAGAGGTTCTTGCGAGAACCTGTGAGCCTCAACAACCTCTGA 750 45.33 MAMAGRIRSIIPVFNQILKSESRTQRPALQRALLCPTTANSEFSRNYATASSKSEVKVKVPLSLFGGSGNYASALYIAAVKANSLDKVETELFDLVEASQRSATFSQFMRDPSVPAHTRVKAITDICTAAKFSEVTKNFLVVLSEYGRLKYIDSIATKFQELTMAHRGEVKAIVTTVIPLPAEEEKELKETLQDIIGQGKKVILEQKIDPSILGGLVVEFNEKLLDVSIKTRAEQMERFLREPVSLNNL 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7485374 7490086 + Carg18675-RA Car17g00909 165281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00909 249 Pfam ATP synthase delta (OSCP) subunit 69 238 IPR000711 GO:0015986|GO:0046933
Car17g00909 249 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 202 221 IPR020781 GO:0015986|GO:0016020|GO:0046933
Car17g00909 249 Hamap ATP synthase subunit delta [atpD]. 63 242 IPR000711 GO:0015986|GO:0046933
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g00911 Car17g00909 CCT
Car01g00201 Car17g00909 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00201 Car-Chr1:1099534 Car17g00909 Car-Chr17:7485374 2.82E-87 wgd
Car14g00911 Car-Chr14:5459842 Car17g00909 Car-Chr17:7485374 2.29E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00909 K02137 - csv:101206351 370.548