Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00919 ATGGCGATGACTAGGGTTCATGAGCCATCGCGATCCTTAGCAGGTAATACATGCACCATTCGGCTGACTGAAATTTTCGGGCGAGCGACCAAGTCTATTTTGGGCTTCTTTCTCATGATGGGTCTCTGCAATGGCGTGCATTACCTTTTGAGACCTTTTTCTCAACCTCGCACTACTTCTGATACGATCGTTGGTTTGGTTGTTGGAAACTTCATGAGGAAAGAACTCGATCTGTCAATACATAAGACGCTGCGTTATATTGTCGACTTTGGTATGACATGCTATATGTTTGTGCTGGGATTGGAGATGGATCCATGTGTACTCTTCAAAGCACCTACACGTGATGCTAAGGTAGCTTATGCCGGAATGATTTCAACACTCATCTTAGCCTGTTCCACAATCCCATTTATTAGCTTTTCGAAGTCGAAAGAGATCAGTTTCATCCTCTCGCTCTCAACTGTTCTCTCTAGCACAGCTTCTCCTGTGCTAACCCGTTTGATCACCAATCTTAAAATAGGCAGGTCGGATATAGGCCGACTTGTTATTGCTGCTGGAATGCATTCTGATTTTATATCCACTCTCGCAATCTGTATAGGTTATCTATTTTGCCAATGCCAAGAGACGCGTCTCTCCATTATAAATGGTTTTCAATTAGGTTTTGTTCTATTGATCCAGATGATAATGGCGGCGAAGGTTTCACCAATATTCATGAACTGGGTGAATAACGAAAACCCCGAGGGTAAACCTATGAAGGGTCCTCACCTGGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGCTGCTGCCCTACTATAATTGGTTACAACCCGACGCTCAGTGCATTCTTGGCTGGAACGTTTTTACCTCGAGAAGGTAGAGTATCAAGATGGGCAATTGGAAAAATTAACTACCTGCTTACTACTGTTTTCTATCCCATCTTCTTCTTTTGGATGGGGGTTGAATCCAAGTTGAGTGACTTCGAGCCTGGACAAATAATAACATGGGTCAGATTACTTCTGCTTTTTGCTATTGTAACCGTAGGAAAAGTTGTTGGTACTGTCATTGCTGGGGCAATTTTGGGGTTTCATTGGCCTGAATCTGTAGCACTTGGGCTGCTGTTAACCATGAAGGGCCATTTTCATATATACTTGGCCATATCTGCAAAAATAGCTGGAAAGATATCTACATCTACGAGCATTGCGATGGTATTTGTAATCTTCTTCACAGTCGTGCATGCTCCAAAAGTTGTAGCTCATATAATTAGAAGGGCGAGGAAACGCACACCTACACATCGAATGGCTCTCGAATTGCTTGACCCATCAAGTGAGCTTAAGATCTTGTTATGTATACATGGACCTCATAACACTGGAGCAGCCATTAACATCATGGAGATTTCTCGGGGGACGGCTAACCCTGGAGTTGTTGTATATGTCACAGACATGATTGAACTTACAGATGAAATAGCAGCCACGTTAGTGCAGGGTGAAGGAGTGGACACTGTAACTGTAACCCACACAGGAGTGACACAAATGAGAGACCAAGTTACTACTGCATTTCAGAGATATGTAGATGAAAATGGAGATGGAATTACCCTTAGAAGAATGTTGGCTCTCTCAGCATTCAATTGTATGGCACAAGACATTTGCATTTTAGCGGAGGACTTGTTGGGTGCTCTTATCATACTGCCATTCCACAAGAACCAGCGCGGAGATGGGTCGTTGAGCGAGGGCCAAGCAGGTTTCCGCTATGTGAACCGCAAGGTTATCAGACACGCCCCTTGTTCTGTGGGAATCCTAGTGGATCGAGGTCTTGGATCAGTAGAGAAAATTTCAAGGTCGTACGTAACCCTGAATGTGGCAGTGATCTTCATTGGCGGTAAAGACGACCGAGAAGCATTGGCCTACGCTGGTCGAGTAGCTAGACATCCTGGAGTTAAACTCTCTGTAATTAGATTCTTGGTGGATGCTGATGCAGAAAATGCTGCAAGAAGAGCTGGGACATACAGGATCAGTGTTGCTGAGCAGGAAGAGGAAATGAGACAAGACGACGAATGCTTTGCTTATTTTTACGAACGACACGTGGCTGGTGGGCACGTCGCTTACGTTGAAAAACACATGGCCAGTTCCGCAGAGACGTATTCTACTTTGAAATCACTGGAAGGTCAATACACTCTCGTAATCGTAGGTCGAGGTGGGGGAGTGAACTCGGTGTTAACTTACGGGATGAATGATTGGCAACAATGTCCAGAACTGGGTCCTATAGGGGACGTTCTTTCCGGGTCTGAATTCTCCGCCAAGACCTCGGTTTTGATCATCCATCAACACAATCTAAAAGGTGAACTAGATGGACTTGATGATGATTTTTCAATAATGTAG 2373 44.46 MAMTRVHEPSRSLAGNTCTIRLTEIFGRATKSILGFFLMMGLCNGVHYLLRPFSQPRTTSDTIVGLVVGNFMRKELDLSIHKTLRYIVDFGMTCYMFVLGLEMDPCVLFKAPTRDAKVAYAGMISTLILACSTIPFISFSKSKEISFILSLSTVLSSTASPVLTRLITNLKIGRSDIGRLVIAAGMHSDFISTLAICIGYLFCQCQETRLSIINGFQLGFVLLIQMIMAAKVSPIFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCCCPTIIGYNPTLSAFLAGTFLPREGRVSRWAIGKINYLLTTVFYPIFFFWMGVESKLSDFEPGQIITWVRLLLLFAIVTVGKVVGTVIAGAILGFHWPESVALGLLLTMKGHFHIYLAISAKIAGKISTSTSIAMVFVIFFTVVHAPKVVAHIIRRARKRTPTHRMALELLDPSSELKILLCIHGPHNTGAAINIMEISRGTANPGVVVYVTDMIELTDEIAATLVQGEGVDTVTVTHTGVTQMRDQVTTAFQRYVDENGDGITLRRMLALSAFNCMAQDICILAEDLLGALIILPFHKNQRGDGSLSEGQAGFRYVNRKVIRHAPCSVGILVDRGLGSVEKISRSYVTLNVAVIFIGGKDDREALAYAGRVARHPGVKLSVIRFLVDADAENAARRAGTYRISVAEQEEEMRQDDECFAYFYERHVAGGHVAYVEKHMASSAETYSTLKSLEGQYTLVIVGRGGGVNSVLTYGMNDWQQCPELGPIGDVLSGSEFSAKTSVLIIHQHNLKGELDGLDDDFSIM 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7545370 7549048 - Carg18665-RA Car17g00919 165291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00919 790 Pfam Sodium/hydrogen exchanger family 43 419 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car17g00919 790 Gene3D - 29 429 IPR038770 -
Car17g00919 790 Gene3D - 444 743 - -
Car17g00919 790 PANTHER CATION/H(+) ANTIPORTER 28 20 787 - -
Car17g00919 790 PANTHER CATION/H + ANTIPORTER 20 787 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00919 Car-Chr17:7545370 Car20g00913 Car-Chr20:9886724 1.01E-112 dispersed
Car17g00919 Car-Chr17:7545370 Car08g00430 Car-Chr8:2801676 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00919 - - csv:101211645 1387.47