Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car17g00926 | ATGGCGGAAGCCAAGCGTCGCGCAAAGCGCCCTAGAATTACGAGGGGGGACGATGATTATATGCCTGGAAGTATAATTGAGATTGAGCTTCATAACTTTATGACCTTTAACCACTTGAAATGTAAACCAGGATCACGTCTAAACCTTGTAATTGGGCCCAATGGATCTGGTAAAAGCTCTATTGTATGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCTCAGCTCCTTGGAAGGGCGACCAGTGTTGGAGCATATGTGAAGCGCGGGGAGGAGTCTGGTTATGTCAGAATAACCTTGAGAGGGAATACTAAAGAGGAGAATATTACAATTACACGTAAAATGGACACACACAACAAATCTGAGTGGTTGTTCAATGGAAAAGTTGTGCCAAAAAAGGATGTAGCTGGAATCATTCAAAGTTTTAACATTCAAGTTAATAACTTGACTCAATTTTTACCTCAGGACAGGGTTTGTGAGTTTGCCAAATTAACTCCCGTCCAACTTTTAGAAGAGACTGAAAAGGCAGTTGGCGATCCTCAACTTCCAATCCTACATCGTGTACTTGTTGAGAAAAGCCATGACATAAAAAATATAGAACGAGCTGTTGAGAAAAATGGAGACACCCTAGATCAGCTAAAGGCATTAAATGTCGAGCAGGAGAAAGATGTTGAGCGTGTTCGTCAAAGAGAAGAACTTTTAAAAAAGGTTGAGTCCATGAAAAAGAAGCTGCCATGGCTGAAGTATGACATGAAAAAGGCTGAATACATGGAAGTTAAGGAAAAGGAAAAGGAGGCAAAAAAGAAGTTAGATGAAGCTGCAAATACTTTGAATGATTTAAAGGAGCCAATTGAGTATGATCACTTGGTTTAA | 870 | 40.8 | MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEYDHLV | 289 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 7591702 | 7596101 | + | Carg18658-RA | Car17g00926 | 165298 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car17g00926 | 289 | Coils | Coil | 195 | 229 | - | - | |
| Car17g00926 | 289 | Coils | Coil | 248 | 279 | - | - | |
| Car17g00926 | 289 | Pfam | AAA domain | 28 | 281 | IPR038729 | GO:0140664 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g00322 | Car-Chr4:1788256 | Car17g00926 | Car-Chr17:7591702 | 3.99E-11 | dispersed | |
| Car17g00926 | Car-Chr17:7591702 | Car17g01218 | Car-Chr17:9270705 | 4.86E-09 | dispersed | |
| Car17g00926 | Car-Chr17:7591702 | Car17g00928 | Car-Chr17:7618452 | 0 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car17g00926 | K22803 | - | csv:101210248 | 509.605 |