Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00957 ATGGTGGTCTTTCGATCGATCGACGCCGATAAGGCGAAGGATAAGGAATTTCCGAATCTCCGGTCGGGTAGCTTTGCTGATATTGGACCGAGGAGATTCATGGAAGATGAACACATAAGGATAGACGATTTGTCTTCGCATTTAGGATCGCTGTTTAAGTTTCCTAAGCCAAGTGCCTTCTATGGGGTGTTTGATGGACATGGAGGACCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGACTCTTTTTTGAGGATGTCAATTTTCCTCAAATGCCAGATTTCGATGAAGTCTTGCCGGAGGAGATACACAATTGCCTCCGGAAAGCATTTCTTCTGGCTGATCAAGCTCTAGCTGATGATTCCGGTGTCAGTAATTCGTGTGGGACGACGGCCCTGACAGCCCTTGTGCTTGGAAGGCATTTAATGGTGGCGAATGCTGGAGATTGCCGGGCTGTTCTCAGCCGGAATGGAGAGGCAGTAGATATGTCACAAGACCACCGACCAATTTATTCGCTGGAGAAGCAACGGGTGGAAGAGTTGGGTGGCTATGTTGATGGTGGCTATCTGAACGGTGTTTTATCGGTGTCGAGGGCGTTGGGGGATTGGGACATGAAGCTCCCACATGGCTCTCCTTCACCTCTCATTGCAGAACCAGAATGCAAGCAGGTGGTTCTTACAGAGGAGGATGAGTTCTTGATCATAGCTTGTGATGGGATTTGGGACGTGATGTCGAGCCAGCAAGCGGTCAATGTAGTTCGACAGGGGCTTCAACGACACGACGACCCGGAGCGGTGTGCTCGAGAGCTTGTCCTGCGTGCTTTGCGATTGGACTCGTTCGATAATCTGACTGTTGTGGTGGTTTGCTTCTCTAGTTTCCATGGCGACGGTTCCTCACTACCACAGCAGAGAAAATTGAGATACTGCAGTCTGTCTGCGCAGGCTCTTTGTAGTCTGCAGAGATGGTTGGATAACAGTGGATGCCAATGA 993 49.45 MVVFRSIDADKAKDKEFPNLRSGSFADIGPRRFMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVNFPQMPDFDEVLPEEIHNCLRKAFLLADQALADDSGVSNSCGTTALTALVLGRHLMVANAGDCRAVLSRNGEAVDMSQDHRPIYSLEKQRVEELGGYVDGGYLNGVLSVSRALGDWDMKLPHGSPSPLIAEPECKQVVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARELVLRALRLDSFDNLTVVVVCFSSFHGDGSSLPQQRKLRYCSLSAQALCSLQRWLDNSGCQ 330
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 7770078 7771411 - Carg07096-RA Car17g00957 165329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car17g00957 330 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
Car17g00957 330 Pfam Protein phosphatase 2C 31 283 IPR001932 -
Car17g00957 330 ProSiteProfiles PPM-type phosphatase domain profile. 21 291 IPR001932 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car08g00400 Car17g00957 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00498 Car-Chr8:3151221 Car17g00957 Car-Chr17:7770078 1.92E-35 dispersed
Car12g01132 Car-Chr12:11013834 Car17g00957 Car-Chr17:7770078 3.87E-85 dispersed
Car17g00854 Car-Chr17:7209200 Car17g00957 Car-Chr17:7770078 7.41E-36 dispersed
Car17g00957 Car-Chr17:7770078 Car09g00337 Car-Chr9:1867742 3.21E-42 dispersed
Car08g01163 Car-Chr8:7791056 Car17g00957 Car-Chr17:7770078 3.26E-132 transposed
Car09g00698 Car-Chr9:4134179 Car17g00957 Car-Chr17:7770078 2.91E-30 transposed
Car17g00957 Car-Chr17:7770078 Car08g00400 Car-Chr8:2592128 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00957 K14803 - csv:101216626 585.874