Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car17g00957 | ATGGTGGTCTTTCGATCGATCGACGCCGATAAGGCGAAGGATAAGGAATTTCCGAATCTCCGGTCGGGTAGCTTTGCTGATATTGGACCGAGGAGATTCATGGAAGATGAACACATAAGGATAGACGATTTGTCTTCGCATTTAGGATCGCTGTTTAAGTTTCCTAAGCCAAGTGCCTTCTATGGGGTGTTTGATGGACATGGAGGACCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGACTCTTTTTTGAGGATGTCAATTTTCCTCAAATGCCAGATTTCGATGAAGTCTTGCCGGAGGAGATACACAATTGCCTCCGGAAAGCATTTCTTCTGGCTGATCAAGCTCTAGCTGATGATTCCGGTGTCAGTAATTCGTGTGGGACGACGGCCCTGACAGCCCTTGTGCTTGGAAGGCATTTAATGGTGGCGAATGCTGGAGATTGCCGGGCTGTTCTCAGCCGGAATGGAGAGGCAGTAGATATGTCACAAGACCACCGACCAATTTATTCGCTGGAGAAGCAACGGGTGGAAGAGTTGGGTGGCTATGTTGATGGTGGCTATCTGAACGGTGTTTTATCGGTGTCGAGGGCGTTGGGGGATTGGGACATGAAGCTCCCACATGGCTCTCCTTCACCTCTCATTGCAGAACCAGAATGCAAGCAGGTGGTTCTTACAGAGGAGGATGAGTTCTTGATCATAGCTTGTGATGGGATTTGGGACGTGATGTCGAGCCAGCAAGCGGTCAATGTAGTTCGACAGGGGCTTCAACGACACGACGACCCGGAGCGGTGTGCTCGAGAGCTTGTCCTGCGTGCTTTGCGATTGGACTCGTTCGATAATCTGACTGTTGTGGTGGTTTGCTTCTCTAGTTTCCATGGCGACGGTTCCTCACTACCACAGCAGAGAAAATTGAGATACTGCAGTCTGTCTGCGCAGGCTCTTTGTAGTCTGCAGAGATGGTTGGATAACAGTGGATGCCAATGA | 993 | 49.45 | MVVFRSIDADKAKDKEFPNLRSGSFADIGPRRFMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVNFPQMPDFDEVLPEEIHNCLRKAFLLADQALADDSGVSNSCGTTALTALVLGRHLMVANAGDCRAVLSRNGEAVDMSQDHRPIYSLEKQRVEELGGYVDGGYLNGVLSVSRALGDWDMKLPHGSPSPLIAEPECKQVVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARELVLRALRLDSFDNLTVVVVCFSSFHGDGSSLPQQRKLRYCSLSAQALCSLQRWLDNSGCQ | 330 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 7770078 | 7771411 | - | Carg07096-RA | Car17g00957 | 165329 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car17g00957 | 330 | ProSitePatterns | PPM-type phosphatase domain signature. | 60 | 68 | IPR000222 | GO:0043169 | |
| Car17g00957 | 330 | Pfam | Protein phosphatase 2C | 31 | 283 | IPR001932 | - | |
| Car17g00957 | 330 | ProSiteProfiles | PPM-type phosphatase domain profile. | 21 | 291 | IPR001932 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car08g00400 | Car17g00957 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car08g00498 | Car-Chr8:3151221 | Car17g00957 | Car-Chr17:7770078 | 1.92E-35 | dispersed | |
| Car12g01132 | Car-Chr12:11013834 | Car17g00957 | Car-Chr17:7770078 | 3.87E-85 | dispersed | |
| Car17g00854 | Car-Chr17:7209200 | Car17g00957 | Car-Chr17:7770078 | 7.41E-36 | dispersed | |
| Car17g00957 | Car-Chr17:7770078 | Car09g00337 | Car-Chr9:1867742 | 3.21E-42 | dispersed | |
| Car08g01163 | Car-Chr8:7791056 | Car17g00957 | Car-Chr17:7770078 | 3.26E-132 | transposed | |
| Car09g00698 | Car-Chr9:4134179 | Car17g00957 | Car-Chr17:7770078 | 2.91E-30 | transposed | |
| Car17g00957 | Car-Chr17:7770078 | Car08g00400 | Car-Chr8:2592128 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car17g00957 | K14803 | - | csv:101216626 | 585.874 |