Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01010 ATGGCTACCAATTCTCATGCCCCCACTCCGAGAGGTCTTCTCTGTAATGCGGGAGCTGGTGCTGCTGCTGGAGTTCTTGCTGCTACGTTCGTGTGCCCTTTGGATGTTATCAAGACCAGATTTCAGGTTCATGGACTGCCAAACATCGGGAAAGGGAGTCTTATAGTTGGTAGTCTGCAGCAAATTTTTCATAAGGAGGGGCTACGTGGAATGTATAGAGGACTCGCACCGACCGTGCTTGCGTTGCTTCCTAACTGGGCTGTCTATTTCACAATCTATGGGCAGCTCAAAAGCTTTCTTCGTTCGGATGTTGAAAATCATCAGCTTTCAATAGGTGCTAATATGATGGCTGCTTCTGGAGCTGGAGCTGCTACAACTATTGCAACGAATCCTCTATGGGTTGTTAAGACCAGGCTTCAGACGCAGGGAATGAAATCTGGTGTGCTACCATATAGAAATACAGTGTCTGCCTTGAGGAGAATAGCCTCTGAAGAAGGCATTCGTGGATTGTACAGTGGTCTTGTTCCTGCTTTGGCCGGTGTAAGTCACGTTGCCATACAGTTTCCAACATACGAAAAAATAAAAAGTTATTTGGCTAGAAGAGACAATACGACGACGGACAAACTCAGCGCACGTGATGTCGCGGTAGCCTCATCTGTCTCCAAGATATTTGCTTCCACATTGACTTATCCACATGAGGTTGTACGTTCCAGGCTTCAGGAACAAGGATTTCACTCTGAGAAGCGTTATTCTGGCGTAACCGATTGCGTAAAGAAAGTATTTCAGCAAGATGGACTCCCCGGCTTCTATCGAGGGTGCGCAACCAACCTTATCAGGACGACCCCGGCTGCTGCCATCACATTTACCAGCTTTGAAATGATTCACCGCTTTCTTGTCAACTTATTTCCTCCTGATCCACATCCACACACGTTATGA 936 47.01 MATNSHAPTPRGLLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPNIGKGSLIVGSLQQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTIYGQLKSFLRSDVENHQLSIGANMMAASGAGAATTIATNPLWVVKTRLQTQGMKSGVLPYRNTVSALRRIASEEGIRGLYSGLVPALAGVSHVAIQFPTYEKIKSYLARRDNTTTDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGFHSEKRYSGVTDCVKKVFQQDGLPGFYRGCATNLIRTTPAAAITFTSFEMIHRFLVNLFPPDPHPHTL 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8030483 8034196 + Carg07150-RA Car17g01010 165382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01010 311 Pfam Mitochondrial carrier protein 108 200 IPR018108 -
Car17g01010 311 Pfam Mitochondrial carrier protein 215 299 IPR018108 -
Car17g01010 311 Pfam Mitochondrial carrier protein 15 102 IPR018108 -
Car17g01010 311 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 1 310 - -
Car17g01010 311 SUPERFAMILY Mitochondrial carrier 13 293 IPR023395 -
Car17g01010 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Car17g01010 311 Gene3D Mitochondrial carrier domain 1 105 IPR023395 -
Car17g01010 311 Gene3D Mitochondrial carrier domain 106 301 IPR023395 -
Car17g01010 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 297 IPR018108 -
Car17g01010 311 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 310 IPR044712 GO:0006862|GO:0055085
Car17g01010 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 99 IPR018108 -
Car17g01010 311 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Car17g01010 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Car17g01010 311 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085
Car17g01010 311 PRINTS Mitochondrial carrier protein signature 124 142 IPR002067 GO:0055085
Car17g01010 311 PRINTS Mitochondrial carrier protein signature 218 240 IPR002067 GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g01045 Car-Chr12:10307676 Car17g01010 Car-Chr17:8030483 4.76E-11 dispersed
Car17g01010 Car-Chr17:8030483 Car12g00312 Car-Chr12:2023975 6.40E-08 dispersed
Car15g00866 Car-Chr15:5109807 Car17g01010 Car-Chr17:8030483 1.65E-138 transposed
Car17g01010 Car-Chr17:8030483 Car05g01031 Car-Chr5:9820968 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01010 K15115 - csv:101204681 570.466