Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01015 ATGGCGGCTGCCCCACCCACCACCGCCGCATTCTACTCTCTCCTCCTCATCTCCCTCTACATCACCGCCGCTGGAATCTCCACCTCCGCCGCTCCCACCGGTTCGGTGTGCAGCTCGGCCCCAGACCCCTCCTACTGCAAATCGGCCCTCCCAAACCAAACCGGCAATGTGTACTCGTACGGACGGTCGTCCGTCAGAAAGTCGCTGTCGTCGTCGCAGAAGTTCCTCCGGCTAGTGGAGAAGTATCTCCGGTCCCGGTCGTCGCTGACGGTGGCGGCAGTTAGGGCGCTGGAGGACTGCCAGCTGCTGGCGGGACTGAACATAGATTACCTGACGACGTCGTTCCGGACGGTGAACTCGACGAGCTGGACGCTGCCGGAGATGAAGGCGGAGGACGTGCAGAGCCTGTTGAGTGCGATATTGACGAACCAACAGACATGTTTGGATGGGCTTAAGGCGACGGCGGGGTCTTGGTCTCTCAAAAATGGCCTTTCCCTCCCACTTGCCGCTGACACCAAGCTCTACTCTATGTCCTTAGCCTTTTTCACCAAAGGTTGGGTACCAAAAAAGAAGAAAAAACCGACATGGACTTCAGCCGGGAGACAGGGCGGGTTCAGCAACGGACGAATGTCACTCAAAATGTCCAGCAGAACCAAAGCGATTTACGAGACGGCAACTCGCCGGAATCTGCTGCAGACTGACGACGGTGGCGACGATCAGATTTCGGTTAGGGACATCGTCGTCGTCAGTCAAGACGGCAGCGGAAATTTCACAACCATTAATGAAGCGATTGCGGCGGCGCCGAACAACTCTGCTCCGACGGACGGCTATTTCTTGATCTTCGTGGATGCTGGAGTTTATGAAGAATACGTGACGATTGCGAAGAATAAGAGGTACTTGATGATGATCGGAGATGGGATTAATCAGACCGTCGTCACTGGTAATCGGAACGTCGTCGACGGCTGGACCACTTTTAATTCCGCCACATTTGCGGTGGTCGGACCCGGATTCGTAGCAGTAAACATGACATTCAGAAACACCGCCGGAGCAATAAAACACCAAGCCGTGGCCGTCCGGAACAGCGCCGACTTATCAACATTCTACCTCTGCAGCTTCGAAGGCTACCAAGACACCTTATACACCCACTCCCTCCGCCAATTCTACCGTGACTGCGATATTTACGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGTCGTCTTACAGAACTGCAACATCTACCCGCGTCTGCCGATGGCCAACCAGTTCAACGCCATCACTGCCCAAGGCCGGACCGACCCAAATCAGAACACCGGCACCTCAATCCACAACTGCCGGATCACGGCAGCCGATGACCTCGCAAACAATAGCGGCGCCAGAGTGAACACGTTCCTCGGGCGGCCATGGAAGGAGTACTCGAGGACGGTTTATATGCAGAGCTTTATGGATGATTTGATTAATCCGGCGGGGTGGAGGGCTTGGGATGGAGATTTTGCTTTGAACACTTTGTATTATGCGGAATTTGGGAATTTTGGGCCGGGATCTAACACGACGGAGAGGGTTAATTGGGTGGGATTTCATTTGATTGATGATACTGATGCTGGGAATTTCACGGCGGGGAATTTTTTGATGGCGGACGATTGGGTGCCGCAGACCGGCGTTCCCTACACCAGCGGCCTCACGGAGTAG 1689 55.12 MAAAPPTTAAFYSLLLISLYITAAGISTSAAPTGSVCSSAPDPSYCKSALPNQTGNVYSYGRSSVRKSLSSSQKFLRLVEKYLRSRSSLTVAAVRALEDCQLLAGLNIDYLTTSFRTVNSTSWTLPEMKAEDVQSLLSAILTNQQTCLDGLKATAGSWSLKNGLSLPLAADTKLYSMSLAFFTKGWVPKKKKKPTWTSAGRQGGFSNGRMSLKMSSRTKAIYETATRRNLLQTDDGGDDQISVRDIVVVSQDGSGNFTTINEAIAAAPNNSAPTDGYFLIFVDAGVYEEYVTIAKNKRYLMMIGDGINQTVVTGNRNVVDGWTTFNSATFAVVGPGFVAVNMTFRNTAGAIKHQAVAVRNSADLSTFYLCSFEGYQDTLYTHSLRQFYRDCDIYGTVDFIFGNAAVVLQNCNIYPRLPMANQFNAITAQGRTDPNQNTGTSIHNCRITAADDLANNSGARVNTFLGRPWKEYSRTVYMQSFMDDLINPAGWRAWDGDFALNTLYYAEFGNFGPGSNTTERVNWVGFHLIDDTDAGNFTAGNFLMADDWVPQTGVPYTSGLTE 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8052657 8055095 - Carg07155-RA Car17g01015 165387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01015 562 Pfam Pectinesterase 247 545 IPR000070 GO:0030599|GO:0042545
Car17g01015 562 ProSitePatterns Pectinesterase signature 2. 393 402 IPR033131 -
Car17g01015 562 Pfam Plant invertase/pectin methylesterase inhibitor 35 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01255 Car-Chr1:11432058 Car17g01015 Car-Chr17:8052657 8.04E-56 dispersed
Car04g01516 Car-Chr4:8807358 Car17g01015 Car-Chr17:8052657 6.39E-179 dispersed
Car17g01015 Car-Chr17:8052657 Car07g00252 Car-Chr7:1371909 8.96E-130 dispersed
Car18g00888 Car-Chr18:9777797 Car17g01015 Car-Chr17:8052657 1.76E-106 dispersed
Car17g01015 Car-Chr17:8052657 Car17g01016 Car-Chr17:8060470 9.15E-137 tandem
Car20g00959 Car-Chr20:11106134 Car17g01015 Car-Chr17:8052657 0 transposed
Car15g00913 Car-Chr15:5737801 Car17g01015 Car-Chr17:8052657 8.64E-96 wgd
Car17g01015 Car-Chr17:8052657 Car05g01033 Car-Chr5:9829928 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01015 K01051 - csv:101205321 973.0