Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01048 ATGGCCGGTATTAAAGTTCACGGAATCCCCACTTCTACAGCCACAGCTAGGGTTCTAGCTGCCCTCTACGAAAAGGGCCTTCAATTCGAGCTTGTTAATGTTAAGTTGCATGAAGGGGAACACAAGAAAGAGCCCTTCCTCTCAATCAATCCCTTTGGTCAAGTTCCTGGGTTTAACGATGGAGATCTGACGCTTTTTGAATCCAGGGCGATCACTCAGTACATCTCGGGAAATTATGCTAGCAACGGAACCGAGTTGATTCCGAAAGACTCCAAGAAAGGGGCGGTCGTGTTAACGTGGATCGAGGTGGAGAGCCACCATTTTGACCCAGTAGCCATGAAACTGGTGTTCGAGTTCTGCCTAAAGCCATTATTTGGTCTGGGTGATGCAGATCCTGCAGTGGTTGAGAAAAGCGAGGCTGAACTAGGCCAAGTTCTTGACATCTATGAGAAAAGGCTGTCCGGGTCCAAATACTTGGGAGGTGACTCCTTCAGCTTGGCTGATCTGCACCATCTCCCCGTATTAGGCTACCTATTGGCTACACCGTCGAAGAAACTGTTTGAATCTAGACCCCATGTCAATGCTTGGGTGGGTGATATCATAGCCAGGCCATCTTGGGCCAAAGTTCTTGCTCTCCGCAAGTGA 645 48.99 MAGIKVHGIPTSTATARVLAALYEKGLQFELVNVKLHEGEHKKEPFLSINPFGQVPGFNDGDLTLFESRAITQYISGNYASNGTELIPKDSKKGAVVLTWIEVESHHFDPVAMKLVFEFCLKPLFGLGDADPAVVEKSEAELGQVLDIYEKRLSGSKYLGGDSFSLADLHHLPVLGYLLATPSKKLFESRPHVNAWVGDIIARPSWAKVLALRK 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8193561 8194999 - Carg07188-RA Car17g01048 165420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01048 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Car17g01048 214 Pfam Glutathione S-transferase, C-terminal domain 109 204 IPR004046 -
Car17g01048 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Car17g01048 214 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00363 Car17g01048 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00676 Car-Chr4:3931288 Car17g01048 Car-Chr17:8193561 4.47E-14 dispersed
Car08g00363 Car-Chr8:2343399 Car17g01048 Car-Chr17:8193561 6.11E-115 dispersed
Car12g00363 Car-Chr12:2329870 Car17g01048 Car-Chr17:8193561 1.57E-53 dispersed
Car16g00531 Car-Chr16:3367926 Car17g01048 Car-Chr17:8193561 3.22E-10 dispersed
Car17g01048 Car-Chr17:8193561 Car08g00362 Car-Chr8:2341432 9.99E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01048 K00799 - csv:101212291 380.563