Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car17g01048 | ATGGCCGGTATTAAAGTTCACGGAATCCCCACTTCTACAGCCACAGCTAGGGTTCTAGCTGCCCTCTACGAAAAGGGCCTTCAATTCGAGCTTGTTAATGTTAAGTTGCATGAAGGGGAACACAAGAAAGAGCCCTTCCTCTCAATCAATCCCTTTGGTCAAGTTCCTGGGTTTAACGATGGAGATCTGACGCTTTTTGAATCCAGGGCGATCACTCAGTACATCTCGGGAAATTATGCTAGCAACGGAACCGAGTTGATTCCGAAAGACTCCAAGAAAGGGGCGGTCGTGTTAACGTGGATCGAGGTGGAGAGCCACCATTTTGACCCAGTAGCCATGAAACTGGTGTTCGAGTTCTGCCTAAAGCCATTATTTGGTCTGGGTGATGCAGATCCTGCAGTGGTTGAGAAAAGCGAGGCTGAACTAGGCCAAGTTCTTGACATCTATGAGAAAAGGCTGTCCGGGTCCAAATACTTGGGAGGTGACTCCTTCAGCTTGGCTGATCTGCACCATCTCCCCGTATTAGGCTACCTATTGGCTACACCGTCGAAGAAACTGTTTGAATCTAGACCCCATGTCAATGCTTGGGTGGGTGATATCATAGCCAGGCCATCTTGGGCCAAAGTTCTTGCTCTCCGCAAGTGA | 645 | 48.99 | MAGIKVHGIPTSTATARVLAALYEKGLQFELVNVKLHEGEHKKEPFLSINPFGQVPGFNDGDLTLFESRAITQYISGNYASNGTELIPKDSKKGAVVLTWIEVESHHFDPVAMKLVFEFCLKPLFGLGDADPAVVEKSEAELGQVLDIYEKRLSGSKYLGGDSFSLADLHHLPVLGYLLATPSKKLFESRPHVNAWVGDIIARPSWAKVLALRK | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 8193561 | 8194999 | - | Carg07188-RA | Car17g01048 | 165420 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car17g01048 | 214 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 2 | 83 | IPR004045 | - | |
Car17g01048 | 214 | Pfam | Glutathione S-transferase, C-terminal domain | 109 | 204 | IPR004046 | - | |
Car17g01048 | 214 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 214 | IPR010987 | - | |
Car17g01048 | 214 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car08g00363 | Car17g01048 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g00676 | Car-Chr4:3931288 | Car17g01048 | Car-Chr17:8193561 | 4.47E-14 | dispersed | |
Car08g00363 | Car-Chr8:2343399 | Car17g01048 | Car-Chr17:8193561 | 6.11E-115 | dispersed | |
Car12g00363 | Car-Chr12:2329870 | Car17g01048 | Car-Chr17:8193561 | 1.57E-53 | dispersed | |
Car16g00531 | Car-Chr16:3367926 | Car17g01048 | Car-Chr17:8193561 | 3.22E-10 | dispersed | |
Car17g01048 | Car-Chr17:8193561 | Car08g00362 | Car-Chr8:2341432 | 9.99E-109 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car17g01048 | K00799 | - | csv:101212291 | 380.563 |