Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01050 ATGGAAGTCGATCGGACGGCTGAGAACGATCACTGTCCCGATCTCCAACAGAGCTCCGGCGAGTCAAGGCCTAACCTGACTGAAACGAACCTCCGACGACACGATTCATTGGACTTCGAATCCCGCTCTGTCAAGGCGGCGGGGAAGGCGGCGGCGACCTGGGGAGTGATACTTCAACTGGCGTTTCAGAGCGTGGGGATTGTGTACGGAGATATCGGAACGTCGCCGTTGTACGTATATGCCAGCACGTTCAGTGAGGGTATCAAGCATAACGACGACGTTTTGGGTGTGCTATCTTTGATTCTCTACACGCTTACCTTAATCCCTTTGGTTAAGTACGTCTTCTTGGTCTTACAGGCCAACGATAACGGCGAAGGTGGGACGTTTGCATTATACTCTTTACTATGCCGATACGCGAAGATCGGGCTGATACCAAGCGAGCAAGCGGAAGATCAAGAGGTATCGAATTTTCAGGTGGAGCTACCGACCAACCGCCTCAAAATGGCGTCTTGCCTGAAGTCCAAGCTGGAGAACAGCCGCGCCGCCAAGGTTTTCTTGCTCTTCGCCACCATGCTCGGCACTTCCATGGTCATCGGCGACAGCGTCCTCACTCCTTCCATCTCCGTTTTATCTGCCGTGGGAGGAATCAAGAATGCTACCTCGACTATGACACAAGAGAAAATAGTGTGGATATCAGCAGCGATCTTGGTTTGCTTGTTCATGGTGCAAAGATTTGGTACCCATAAAGTTGGATACTCCTTTGCTCCCATTATTTGCACTTGGTTTGTACTTATTGGTGGCATTGGCTTCTACAATTTCTTGAAATTTGACCCTTCTGTCATCAAAGCTGTTAATCCTATTTACATTTTTTACTACTTCAAACGAAACAAAAGGGACGCTTGGATCTCTCTCGGTGGTGCCGTTCTTTCCATTACTGGGACTGAGGCTCTGTTTGCGGACTTGGGGCACTTTAGTGTGACGTCTATAAGACTAAGCATGTGTTGTGTGGCTTACCCTGCCCTTGTCTCTGCGTACATTGGCCAAGCCTCCTTTCTTCGTGAGCATGCTGATCTTGTCTCCGACACCTTCTTTAGATCCATTCCAGGTGCTCTCTATTGGCCTATGTTTGTGGTGGCCGTGCTCGCCTCCATCGTCGCTAGCCAAGCGATGATCTCGGGTACCTTCTCCATCATCCAACAGTCCCTCTCCTATGGCTGCTTCCCTAGAGTTAAAGTTATTCATACTTCTTCCAAGTATGAGGGTCAAGTTTATATCCCCGAAGTTAACTATCTTCTTATGGTGGCTTGTCTTGGAGTCACTATAGGGTTCAAAGATACAACTAGAATCGGAAATGCTTATGGAATTGCAGTGGTGTTCGTAATGACACTTACTTCAAGTTTCTTGGTGCTCATCATGATCATGATATGGAAATCTCACATTCTCGTCATACTATCCTATGTTTTCACCATTGGTTTATTGGAGCTTTTATATCTAAGTTCAGTCCTTTACAAGTTCGATCGAGGGGGCTATCTTCCTTTAGCTTTTGCGGGGTTTCTCATGATAATAATGTACATTTGGTATGACGTCCATAGGAGAAAATACTACTACGAGCTTGAGCACAAGATTTCTCCTCAAAAGCTCAAGGACATGCCATCTCTCACAACTCTCAATCGTGTCCCTGGCCTTGCCTTATTCTACTCCGAGCTTGTCCAAGGCATACCCCCAATCTTCAAGCATTATATAGCCAACATTCCCACTCTCCAAAGGGTCCTCGTTTTCGTGTCCTTCAAATCCCTCCCAATAAGCAAAGTCCTAATGGAAGAGCGGTTCCTGTTTAGACGAGTCGAGCCTGATGATCTCAACGTGTTTCGATGCGTGGTTCGATATGGGTACAAAGATATCATCCACGAACAAGAGTCATTCGAGAGAGTACTAGTGGAGAAATTAAAGATATTTATAGAAGAAGAGTCATGGATATTACGAAACGAAGATAACGATAGAGCAAGCAGGGTATATGAAGGGATAGAGGTGGTGGATAGAGCTTGGAGAGATGGAATTGTTCACTTGATCGGACAAAACGAGGTGGTGGCAAGTAATGGGTCAGGGTTAGCTAAACGGGTTTTGATCAATTATGCGTACAATGCATTAAGGAGAAATTTGAGACAAAATGAAGAGATCTTCTACATCCCTAGAGAGCGTATGCTCAAAGTAGGAATGACGTATGAGCTTTAA 2232 46.1 MEVDRTAENDHCPDLQQSSGESRPNLTETNLRRHDSLDFESRSVKAAGKAAATWGVILQLAFQSVGIVYGDIGTSPLYVYASTFSEGIKHNDDVLGVLSLILYTLTLIPLVKYVFLVLQANDNGEGGTFALYSLLCRYAKIGLIPSEQAEDQEVSNFQVELPTNRLKMASCLKSKLENSRAAKVFLLFATMLGTSMVIGDSVLTPSISVLSAVGGIKNATSTMTQEKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICTWFVLIGGIGFYNFLKFDPSVIKAVNPIYIFYYFKRNKRDAWISLGGAVLSITGTEALFADLGHFSVTSIRLSMCCVAYPALVSAYIGQASFLREHADLVSDTFFRSIPGALYWPMFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVIHTSSKYEGQVYIPEVNYLLMVACLGVTIGFKDTTRIGNAYGIAVVFVMTLTSSFLVLIMIMIWKSHILVILSYVFTIGLLELLYLSSVLYKFDRGGYLPLAFAGFLMIIMYIWYDVHRRKYYYELEHKISPQKLKDMPSLTTLNRVPGLALFYSELVQGIPPIFKHYIANIPTLQRVLVFVSFKSLPISKVLMEERFLFRRVEPDDLNVFRCVVRYGYKDIIHEQESFERVLVEKLKIFIEEESWILRNEDNDRASRVYEGIEVVDRAWRDGIVHLIGQNEVVASNGSGLAKRVLINYAYNALRRNLRQNEEIFYIPRERMLKVGMTYEL 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8207461 8211137 + Carg07190-RA Car17g01050 165422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01050 743 MobiDBLite consensus disorder prediction 1 32 - -
Car17g01050 743 MobiDBLite consensus disorder prediction 12 26 - -
Car17g01050 743 Pfam K+ potassium transporter 61 633 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00359 Car17g01050 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g01050 Car-Chr17:8207461 Car04g01931 Car-Chr4:11870959 0 dispersed
Car14g01219 Car-Chr14:10591000 Car17g01050 Car-Chr17:8207461 4.05E-16 transposed
Car14g00810 Car-Chr14:4739997 Car17g01050 Car-Chr17:8207461 5.58E-40 wgd
Car17g01050 Car-Chr17:8207461 Car08g00359 Car-Chr8:2323331 5.85E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01050 K03549 - csv:101213493 1303.5