Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01068 ATGGATTCATTTTTGGGAAACACCGTGATGAAGTTGGCTTTGAAATCAGACCCTGAAGAGCATCGCGTTGCATTGTTTGTATTACTTCTCTGTGCTTGTATTGTAATTGGGCATCTTCTTGAGAAAAGTCGTTGGATAAATGAATCAGTCACTGCTATTTTCATTGGTCTTTTCACTGGAACTCTCATCTTATTAACAACCAAAGGCAGAAACTCACGTATCCTAGTGTTTAGTGAAGAGCTTTTCTTCATTTATGTTCTTCCACCCATAATTTTTAATGCTGGATTTCAGGTGAAAAAGAAACAGTTCTTTCGGAACTTTCTAATGATCATGTTGTTTGGGGCTGTTGGTACTGCGATCTCATTTTTCATCATATCACTTGGTTCACTACATATATTCAAGAAATTGGATATTGGCTTCTTAGACGTGGGTGATTATTTTGCCCTAGGAGCAATCTTATCAGCCACAGATAGTGTTTGCACTTTGCAGGTGCTTAATCAGGACGAGACTCCTTTACTGTATAGCCTAGTCTTTGGTGAAGGTGTGGTTAATGATGCTACTTCTGTCGTGCTTTTCAAAGCAATCCAGAGATTCGACCTCTCTCACATCACCTCATCCAATGCCATTCAGCTTCTTGGAAACTTTTCCTATTTATTTTTGATGAGCACCTTGCTGGGAGTGATAGTTGGGCTGTCCAGTGCATACATCATAAAGAAACTGTACTTTGGCAGGCACTCGACCGATCGGGAGGTTGCTTTGATGATTTTAATGCCTTACCTTTCGTATATGACTGCTGAATTGTGCAATCTTAGTGGTATTCTTACCATGTTCTTTTGCGGGATTGTCATGTCTCATTACACTTGGCATAATGTGACTGAAAGTTCAAGAGTGACCACCAAGCATACTTTTGCAACGCTCTCATTTGTTTCAGAGATTTTCATCTTCTTATACGTTGGCATGGATGCCTTGGATATTGAGAAGTGGAAAATTGTTGGCCGAAGGCCTTGGACATCGGCTGGTGTGAGTCTAATACTGCTTGGTTTAGTCCTTGCTGCAAGGGCAGCTTTTGTATTTCCGCTCTCGTTTATATCGAACTTGACTAGAAAGTCTCAGAGCGACAGAATCGGGTTTAAGCAGCAGGTTACAATTTGGTGGGCTGGGCTCATGAGAGGTGCTGTGTCTGTGGCCCTTGCTTATAATCAGTTTACAAGGTCAGGGTACACACAGCTGCAAGAGAATGCGATTATGATTACTAGCACGATCACGATTGTTCTCGTCACTAATGTGGTATTTGGACTCTTAACTAAACCCATTGTAAGGTACATGCTTTCACTGCATGATACACCAATAGATGCCACAATTGTAGCAGCAGCAGATTCTCCAGTTAAGTCGCTGACCGACGTTCTTTTGTCTGGTGGTGAAGATGTCGAAGCCGATGTTCGAGAATCGAACATTCCCCGTCCTACCAGCTTACGTATGCTGTTAACAACTCCAACTCATTCCGTCCATTACTATTGGCGGATGTTCGATGATCGATACATGCGTCCTGTATTTGGTGGAAGAGGCTTCGTCCCTTTCATCCCTGGCTCACCAACTGAAAAGTATATCCACTGA 1614 42.32 MDSFLGNTVMKLALKSDPEEHRVALFVLLLCACIVIGHLLEKSRWINESVTAIFIGLFTGTLILLTTKGRNSRILVFSEELFFIYVLPPIIFNAGFQVKKKQFFRNFLMIMLFGAVGTAISFFIISLGSLHIFKKLDIGFLDVGDYFALGAILSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQRFDLSHITSSNAIQLLGNFSYLFLMSTLLGVIVGLSSAYIIKKLYFGRHSTDREVALMILMPYLSYMTAELCNLSGILTMFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVSEIFIFLYVGMDALDIEKWKIVGRRPWTSAGVSLILLGLVLAARAAFVFPLSFISNLTRKSQSDRIGFKQQVTIWWAGLMRGAVSVALAYNQFTRSGYTQLQENAIMITSTITIVLVTNVVFGLLTKPIVRYMLSLHDTPIDATIVAAADSPVKSLTDVLLSGGEDVEADVRESNIPRPTSLRMLLTTPTHSVHYYWRMFDDRYMRPVFGGRGFVPFIPGSPTEKYIH 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8308602 8314975 + Carg07208-RA Car17g01068 165440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01068 537 Pfam Sodium/hydrogen exchanger family 26 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car17g01068 537 ProSiteProfiles cAMP/cGMP binding motif profile. 121 153 IPR000595 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00315 Car17g01068 CCT
Car01g00315 Car17g01068 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01051 Car-Chr11:8054318 Car17g01068 Car-Chr17:8308602 0 dispersed
Car13g00241 Car-Chr13:4390857 Car17g01068 Car-Chr17:8308602 6.60E-19 dispersed
Car13g00242 Car-Chr13:4399328 Car17g01068 Car-Chr17:8308602 5.41E-12 dispersed
Car17g01068 Car-Chr17:8308602 Car18g00580 Car-Chr18:6521603 1.09E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01068 - K14724 csv:101206431 947.962