Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01078 ATGGCTGGGAGTAATGAAGTCAATCTTAATGAATCTAAGAGGGTTGTTCCTTTGAACACATGGGTGCTCATATCCAATTTCAAGCTAGCTTACACCATCCTCCGCCGCTCTGATGGCACCTTCAACCGTGAGTTAGCGGAGTATCTCGAGCGCAAAGTTCCAGCCAATGTGAATCCAGTTGATGGGGTTTTCTCATTTGATAATGTCGATCGAGCTTCTGGCCTTCTCAACCGAGTTTATCAGCCGGCCCCAGATAATGAAGCTCGCTGGGGCATCATTGATCTTGAGAAGCCTCTAAGCAAGTCGAAAGTTGTACCTGTCATCCTGTTTTTTCATGGTGGGAGCTTTGCTCATTCATCAGCCAACAGTGCTATTTACGACACCTTTTGCCGCCGTATCGTAAGTGTCTGCAAGGCAGTTGTTGTCTCGGTTAACTACCGTCGATCGCCTGAATATCGATATCCATGTGCATACGAAGATGGCTGGACTGCACTCAAATGGGTGAAATCAAAGAAATGGCTTCAAAGTGGGAAGGATTCCAAGGTTCATGTGTATTTAGCTGGTGATAGTTCTGGTGGCAACATAGCTCATCATGTTGCAGCAAGGGCAGCCGAGGAAGACATCGAAGTATTAGGCAACATACTTCTTCACCCGATGTTCGGGGGCGAAAAGAGAACCGAATCAGAGAAGAAACTCGACGGTAAATACTTCGTAACCATTCAAGACCGAGATTGGTACTGGAAAGCTTATCTCCCTGAAGGAGAAGACAGAGACCACCCAGCTTGTAACATTTTTGGCCCCAAAGCCAAAAGCCTAGAGGGAATCAACTTCCCGAAAAGTCTCGTCGTTGTCGCCGGTCTGGACCTGATGCAAGATTGGCAACTCGCATATGTGCAAGGCCTGAAAGACTCCGGTCACGATGTGAAACTTCTCTTCCTCGAGAAGGCGACAATTGGGTTCTATTTCTTGCCAAACAATGAACATTTCTACTGTCTAATGGAAGAGATAGACCACTTTATCAACCCTTAA 1029 46.55 MAGSNEVNLNESKRVVPLNTWVLISNFKLAYTILRRSDGTFNRELAEYLERKVPANVNPVDGVFSFDNVDRASGLLNRVYQPAPDNEARWGIIDLEKPLSKSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSVCKAVVVSVNYRRSPEYRYPCAYEDGWTALKWVKSKKWLQSGKDSKVHVYLAGDSSGGNIAHHVAARAAEEDIEVLGNILLHPMFGGEKRTESEKKLDGKYFVTIQDRDWYWKAYLPEGEDRDHPACNIFGPKAKSLEGINFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHDVKLLFLEKATIGFYFLPNNEHFYCLMEEIDHFINP 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8370949 8372994 + Carg07218-RA Car17g01078 165450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01078 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Car17g01078 342 PANTHER ARYLACETAMIDE DEACETYLASE 2 340 - -
Car17g01078 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Car17g01078 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Car17g01078 342 SUPERFAMILY alpha/beta-Hydrolases 84 341 IPR029058 -
Car17g01078 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Car17g01078 342 PANTHER GIBBERELLIN RECEPTOR GID1B 2 340 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00333 Car17g01078 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g01078 Car-Chr17:8370949 Car08g00265 Car-Chr8:1665245 3.02E-69 dispersed
Car01g01158 Car-Chr1:10667875 Car17g01078 Car-Chr17:8370949 0 transposed
Car10g00960 Car-Chr10:8732848 Car17g01078 Car-Chr17:8370949 0 transposed
Car17g01078 Car-Chr17:8370949 Car08g00333 Car-Chr8:2156139 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01078 K14493 - csv:101219912 657.907