Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01133 ATGGGCAACGCCGACTATGTGTACCCATCGGCGGCGGAAGGCGGCGAGAGCTTGCACAAGGCGGCGATTCCGCCGCCGCAGCCGTTCGTGAAGTCGCTGAAGAATTCTCTTAAGGAGACGTTCTTCCCAGACGACCCGCTCCGGCAGTTCAAGAACCAGCCGGCGAGGAGGAAGATTGTTCTGGGTTTGCAGTACTTCTTCCCTGTAGTGGAATGGGGGCCTCGTTATAATCCTGGGCTCCTGAAATCGGATCTCATCTCCGGTATAACCATTGCTAGCCTCGCCATTCCTCAGGGCATTAGCTACGCCAAGCTCGCTAACTTGCCCCCTATCCTCGGCCTCTATTCGAGTTTTATTCCGCCGCTGATATATGCAATGATGGGAAGCTCGAAGGATTTGGCTGTCGGAACGGTGGCGGTGGCGTCGCTTCTAATGGGCGCAATGTTAGGGGCGGAGGTTAACGCCGCCCAAAATCCCACTCTTTATCTCCACCTTGCTTTCACCGCCACTTTCTTCGCCGGAGTATTCCAGGCCTCCTTAGGCCTCTTAAGATTAGGGTTCATCGTGGATTTTTTGTCACACGCCACCATTGTCGGGTTCATGGGCGGCGCTGCCACCGTGGTGTGCCTGCAACAGCTCAAAGGCATCCTTGGTCTCACCCATTTCACCCACGCCACCGATCTTGTTTCTGTTCTTCGCTCCGTTTTTTCCCAAATTCACGAGTGGAGATGGCAGAGTGGAGTATTGGGATGCGGTTTTCTGCTCTTCCTCCTGATCACCAAATACTTTAGTAAGAAAAAACCGAAATTCTTTTGGATATCAGCAATGGCGCCTTTAACGTCGGTGATTTTGGGAAGCCTTCTAGTGTTTCTCGCTCATGCAGAAAAGCATGGCGTTGAAGTGATTGGAGAATTGAAGAAAGGGTTAAATCCAGTGTCTATTACAGATTTGGTGTTGGTGTCACCTTATCTTTCCACAGCGATTAAAACTGGCATCATCACTGGTGTCATAGCTCTTGCGGAAGGAATAGCAGTAGGAAGAAGCTTTGCGATGTTCAAGCATTACAACATCGACGGCAACAAGGAAATGGTGGCTATTGGCACCATGAACATGGTCGGCTCTTGCTTCTCCTGCTATCTCACCACAGGCCCGTTTTCGCGATCGGCAGTGAACTACAATGCAGGATGCAAAACGGCGGTATCGAACGTGGTAATGGCGATTGCAGTGATGCTGACGCTGTTGTTCTTGACTCCTCTGTTCTACTACACTCCTATTGTTGTGCTTTCTTCTATCATCATTTCCGCCATGCTTGGCCTCATCGATTACGACGCCGCTATTCACTTGTGGAAGGTCGATAAGTTCGATTTCCTTGTCTGCATTGCCGCTTATGCTGGTGTTGTCTTTGCTAGTGTTGAAATTGGCTTGGTCATTGCGGTGGTAATATCTCTGCTAAGACTACTTTTGTTCGTTGCGAGGCCAAGGACACTCGTGCTTGGAAACCTTCCCAATTCCACGGTTTACAGGAACGTCGAGCAATACCCGAATGCCGATAATGTTCCCGGTATTCTCATACTTGAGATCGACGCTCCCATTTACTTTGCTAATTCCAGCTACTTGAGAGAAAGGATTATAAGGTGGGTTGATGAAGAGGAAGACAGGATAAAAGCTTCCGGCGAAAGTACCTTACAATATGTAGTTCTGGACATGAGTGCTGTTGGCAACATTGATACGAGTGGAATAAGCATGTTTGAAGAGATCAAGAACATTTTAACTAGAAGGGGATTGAAGATAGTTTTGGCCAACCCTGGAGCTGAGGTGATGAAGAAGCTGGACAAGGGCAAGTTCATTGAAAGCCTCGGACACGAATGGATCTATCTTACTGTTGCTGAAGCTGTAGCAGCCTGCAACTATAGGCTTCACTCTTGCAAACCAAACCTTGTAACTGATGAGAAAGCAGAGCCATGGAACAATGTCTAA 1977 48.86 MGNADYVYPSAAEGGESLHKAAIPPPQPFVKSLKNSLKETFFPDDPLRQFKNQPARRKIVLGLQYFFPVVEWGPRYNPGLLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSKDLAVGTVAVASLLMGAMLGAEVNAAQNPTLYLHLAFTATFFAGVFQASLGLLRLGFIVDFLSHATIVGFMGGAATVVCLQQLKGILGLTHFTHATDLVSVLRSVFSQIHEWRWQSGVLGCGFLLFLLITKYFSKKKPKFFWISAMAPLTSVILGSLLVFLAHAEKHGVEVIGELKKGLNPVSITDLVLVSPYLSTAIKTGIITGVIALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNMVGSCFSCYLTTGPFSRSAVNYNAGCKTAVSNVVMAIAVMLTLLFLTPLFYYTPIVVLSSIIISAMLGLIDYDAAIHLWKVDKFDFLVCIAAYAGVVFASVEIGLVIAVVISLLRLLLFVARPRTLVLGNLPNSTVYRNVEQYPNADNVPGILILEIDAPIYFANSSYLRERIIRWVDEEEDRIKASGESTLQYVVLDMSAVGNIDTSGISMFEEIKNILTRRGLKIVLANPGAEVMKKLDKGKFIESLGHEWIYLTVAEAVAACNYRLHSCKPNLVTDEKAEPWNNV 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8699382 8704185 - Carg07273-RA Car17g01133 165505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01133 658 Pfam STAS domain 513 631 IPR002645 -
Car17g01133 658 Pfam Sulfate permease family 81 461 IPR011547 GO:0016021
Car17g01133 658 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Car17g01133 658 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00573 Car-Chr8:3785602 Car17g01133 Car-Chr17:8699382 0 dispersed
Car15g00671 Car-Chr15:3743521 Car17g01133 Car-Chr17:8699382 0 dispersed
Car17g00760 Car-Chr17:6724810 Car17g01133 Car-Chr17:8699382 0 dispersed
Car19g00217 Car-Chr19:2118407 Car17g01133 Car-Chr17:8699382 0 dispersed
Car08g00293 Car-Chr8:1878233 Car17g01133 Car-Chr17:8699382 0 transposed
Car14g01569 Car-Chr14:12815470 Car17g01133 Car-Chr17:8699382 0 wgd
Car17g01133 Car-Chr17:8699382 Car06g01192 Car-Chr6:8732347 0 wgd
Car17g01133 Car-Chr17:8699382 Car08g00292 Car-Chr8:1877463 8.82E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01133 K17471 - csv:101222260 1198.73