Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01151 ATGGAAGAGGTTGAAGATGCTAATAGGGAAGCTGTTGAGAGTGTTCATAAAGTATTGAATCTGTTGACTGTGACATCGCCTCAAGATCAGTCCAAGATTACGCGTTGTTTAATGACGGAAACTGGAGAGGCTGTGTTTAAGTTTAGGAAGGTTTTGTGTCTTCTTGATTCTGTTGGGTTGGGTCATGCAAGGGTCAGGAAAAAGAAGAAGATCATGAACTTTCATCTTGATTCCTCGCCTTCCCAATCAATGTTCTTAGAATCTTCTTCCCCTAATTGCAGAATGGACCTTCTCCAGGGGAGGAATTTGCAGATGGGTCCTCACCTATCTTTGGAATTGAACTCAAATGCCAGAAACTGTTCAATCCAACAGATTCAACCTCAATCTGCTGCTGTTTATCATCATCTGCTTCAGAACAGAGTGTTGTTGAATACTCAGCAGCCTGAAATGGGGTATCTTAGGAGCAATAGTGGTGTTAACTTGAATTTTGATAGCTCTAGCTGCACACAACACACAATGTCATCCACTAGGTCGTTTATGTCTTCCTTGAGCATTGATGGGAGTGTGGCAAACTTGGATGGGAGTGGCTTTCATTTGATCGGGACGCCTCGGTCTTCCGATCAGAATTCACGCCATAAAAGGAAGTGTTGTAGGAGAGGGGAAGATGGGAGTGTTAAATGTGGAAGCAGTGGGAGATGTCATTGCTCAAAGAAGAGGTTGGGAAGTTTTGGTTTTGTTTATGATATCGTTTCGATACCAAAATGGGGACGGAAACATAGAGTGAAGCGGTCGATCAAGGTGCCTGCCATTAGTAACAAGCTTGCTGATATCCCTCCTGATGATTTCTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGCTCTCCTCACCCGAGAGGATACTATAAGTGCAGCAGCATGAGAGGTTGTCCAGCAAGGAAGCATGTCGAGCGGTGTCTCGAGGAACCTTCAATGCTCATTGTTACATATGAAGGTGAACACAACCATCCCAGAATAGCTTCTCAATTCCCAAATACTTGA 1041 44.0 MEEVEDANREAVESVHKVLNLLTVTSPQDQSKITRCLMTETGEAVFKFRKVLCLLDSVGLGHARVRKKKKIMNFHLDSSPSQSMFLESSSPNCRMDLLQGRNLQMGPHLSLELNSNARNCSIQQIQPQSAAVYHHLLQNRVLLNTQQPEMGYLRSNSGVNLNFDSSSCTQHTMSSTRSFMSSLSIDGSVANLDGSGFHLIGTPRSSDQNSRHKRKCCRRGEDGSVKCGSSGRCHCSKKRLGSFGFVYDIVSIPKWGRKHRVKRSIKVPAISNKLADIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIASQFPNT 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8826624 8829087 - Carg07291-RA Car17g01151 165523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01151 346 Pfam WRKY DNA -binding domain 280 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car17g01151 346 ProSiteProfiles WRKY domain profile. 273 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car17g01151 346 Pfam Plant zinc cluster domain 257 276 IPR018872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g01151 Car-Chr17:8826624 Car19g00051 Car-Chr19:341369 1.95E-118 dispersed
Car17g01151 Car-Chr17:8826624 Car02g01517 Car-Chr2:9786948 7.14E-69 wgd
Car17g01151 Car-Chr17:8826624 Car08g00285 Car-Chr8:1797830 3.90E-180 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5097 PF03106 WRKY 6.60E-26 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01151 - - csv:101216822 521.931