Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01159 ATGGCGATTCTAAAGCTCTTTTCTCTCTGCATTTGCTTCTTCTTATTGATCAGAGCCCCTGTACGTGGTGATTCCTTACATTTCCCTTCTTCTTCTTCTTCCCCCTCTTCTGTTTCTTCTGATGTTCTACTTCTTTTGGGAAAGATCAGAGCTTCACTTGAAGGTGACACTCAAAACTTACTTTTATCTTCATGGAACTACTCTTTGCCTCTTTGTCAATGGAGGGGACTCAAATGGGTCTTCTCTAGTGGAACTCTTCTGGTCTGCAGTGATTCTTCTTCTCCACAGTGGTCTAATCTCACTCTTTTCAAAGACCCTTCCCTTCATGTTCTCTCCCTGCAACTTCCATCTGCTAATCTCACTGGTTTATTGCCCAAGGAGCTTGGTGAGTTTACTATGCTCCAAAGCCTCTATCTAAGCATAAACTCTTTGACTGGAACCATTCCACTTGAACTTGGTTACAGCTCCTCTCTTTCTGACATTGATTTGAGTAGTAATCTGTTGACCGGAGCTCTTCCACCGTCGATCTGGAATCTGTGTGATAAACTTGTTTCTGTCAGGCTTCATGGAAATTCATTATCTGGGTCTCTGTCGGAGCCGGCTTTACCAAATTCCACCTGCAAGAATTTGAAGGCTTTGGATTTGGGTAACAACCAGATTTCAGGTACTTTCCCAGAATTCATTACTAGGTTTCAGGGTCTGAAAGAGCTTGATCTTGGAAAGAATTTGTTGTCTGGAAAAGTCCCACAGAGCTTAGGCCAATTAGAGCTGGAGAAGTTGAACCTTTCAAACAACAATTTCAGTGGAATATTGCCTGTTTTTGGTAACTCAAAGTTTGGCGTTGAGGCTTTTGAAGGGAACAGTCCTGGGCTTTGTGGGGAGCCTTTGAAAACTTGTGCAGGACCTTCCCATTTGAGTTCAGGTGCCATTGCTGGCCTTGTTATCGGCTTGATGACTGGGACAGTGGTTTTAGCGTCGTTGCTTATTGGTTATATGCAAAACAAGAAGAAGAATAGGAGTGAGAGTGAAGATGACATTGAGGAAGGAGAAGATCAAGAGAATGGCAGCAGTGATGGAAAGCTCATTTTGTTTCAGGGTGGAGAGCATTTGACATTGGATGATGTCTTGAATGCTACAGGGCAGGTTATGGAGAAAACAAGCTATGGCACTATATATAAGGCAAAGCTTGCTGATGGAGGTACCATTGCTCTTAGACTGCTGAGGGAAGGTAGTTGCAAAGACAGAAATTCTTGTTTGTCTGTGATCAAACAGCTGGGAAAGATCCGTCATGAGAACTTGATTCCATTGAGAGCTTTCTATCAGGGGAGGAGAGGAGAGAAGCTCCTCATTTATGACTATCTCCCTATCAGAACTTTGCATGATTTTCTACATGAGTCTAGAGCAGGAAAACCAGTGTTGAACTGGGCCAGGAGGCACAAGATTGCATTAGGCATCGCCCGAGGACTAGCTCATCTTCACACAGGTCTTGAAGTGCCCATTACACATGGAAACGTTAGATCAAAAAACGTGCTTGTGGATGACTTCTTTGCAGCGAGACTGATGGAGTTCGGGCTCGACAAGCTAATGATACCATCGGTGGCTGACGAAATCGTGTCGCTTGCAAAATCAGATGGTTACAAGGCACCAGAGCTGCAAAGGATGAAGAAATGCAATTCCAGAACAGATGTGTATGCATTTGGAATCTTGCTATTGGAAATTCTGATTGGGAAGAAGCCAGGAAAAAGTGGAAGAAATGGAGAGTTTGTGGATCTGCCATCAATGGTGAAAGTGGCTGTTTTGGAGGAGACAACAATGGAGGTTTTTGATGTGGAGGTGTTGAAAGGGATCAGAAGTCTCATGGAAGATGGAATCGTTCAGGCATTGAAGCTTGCAATGGGCTGCTGTGCTCCAGTGGCTTCCGTAAGACCCTCCATGGATGAAGTTGTGAAGCAGCTGGAAGAGAACAGACCAAGAAACAGATCTGCTCTGTACAGCCCAACTGAAACAAGAAGTGAAATTGGTACGCCTTTTTGA 2034 44.1 MAILKLFSLCICFFLLIRAPVRGDSLHFPSSSSSPSSVSSDVLLLLGKIRASLEGDTQNLLLSSWNYSLPLCQWRGLKWVFSSGTLLVCSDSSSPQWSNLTLFKDPSLHVLSLQLPSANLTGLLPKELGEFTMLQSLYLSINSLTGTIPLELGYSSSLSDIDLSSNLLTGALPPSIWNLCDKLVSVRLHGNSLSGSLSEPALPNSTCKNLKALDLGNNQISGTFPEFITRFQGLKELDLGKNLLSGKVPQSLGQLELEKLNLSNNNFSGILPVFGNSKFGVEAFEGNSPGLCGEPLKTCAGPSHLSSGAIAGLVIGLMTGTVVLASLLIGYMQNKKKNRSESEDDIEEGEDQENGSSDGKLILFQGGEHLTLDDVLNATGQVMEKTSYGTIYKAKLADGGTIALRLLREGSCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGRRGEKLLIYDYLPIRTLHDFLHESRAGKPVLNWARRHKIALGIARGLAHLHTGLEVPITHGNVRSKNVLVDDFFAARLMEFGLDKLMIPSVADEIVSLAKSDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSMVKVAVLEETTMEVFDVEVLKGIRSLMEDGIVQALKLAMGCCAPVASVRPSMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8944334 8946929 - Carg25546-RA Car17g01159 165531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01159 677 MobiDBLite consensus disorder prediction 658 677 - -
Car17g01159 677 MobiDBLite consensus disorder prediction 338 358 - -
Car17g01159 677 ProSiteProfiles Protein kinase domain profile. 377 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g01159 677 Pfam Leucine rich repeat 209 267 IPR001611 GO:0005515
Car17g01159 677 Pfam Protein tyrosine and serine/threonine kinase 381 652 IPR001245 GO:0004672|GO:0006468
Car17g01159 677 MobiDBLite consensus disorder prediction 657 677 - -
Car17g01159 677 Coils Coil 332 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00185 Car-Chr16:1062096 Car17g01159 Car-Chr17:8944334 8.12E-68 dispersed
Car17g01159 Car-Chr17:8944334 Car04g01016 Car-Chr4:5823672 1.87E-14 dispersed
Car17g01159 Car-Chr17:8944334 Car08g00054 Car-Chr8:332173 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89489 PF07714 PK_Tyr_Ser-Thr 4.60E-24 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01159 - - cmo:103497530 1205.66