Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car17g01227 | ATGCGCGGCGGCGATAAGAAGTCCGGTCTCAAATTTGCCGTAATGGCGGTGCTTCTGCTACTGATAGCGATCGAGGAAGCCGGAGTCGCGACGGTGACGGCGAGGCCGATTCGAGACTCCAGCGAATCATACGCTCATGTTCGCGTAGCTACGTTTCGGACATTCATCTTGGGAGTCGGTATGGACAATCCTGTGAATATCGTTGTTGGTTCTCACATATGGGTGGGAGATATCGAGTCTGTTTGGATTGATGGACTCGTATTGAACATCATTGGGGAAGATGCTGAGATTCAAACTAGTGATGGGAGGCAGGTGGTTGTAAAAATGTCGAATCTATATCCAAGGGATGCAGAAGCTCCTGCTACTGGAATTGACGATATGACTAGAATGTCGTATTTGAATGAGCCTGGGTTGCTGCATAATTTGGCTATCAGATATGCAATAAATGAAATCTATACTTATACTGGAAATATTCTTATTGCCATCAACCCATTCCAAAGTATTTCAAATCTGTATGATCCGTGTGTGATGGAGCAGTACAAGGGAGCACCAGTGGGGGAGCTGAAGCCTCATGTTTTTGCAATTGCTGATGTCGCATATAGGGCTATGATAACTAATGGGAAAAGCAACTCTATTCTGGTAAGTGGTGAAAGTGGGGCTGGTAAGACTGAAACCACCAAAATGCTTATGTGTTACCTTGCATTTTTGGGCGGCAAGGCTGCATCTGAAGGACGGTCTGTTCAACAACAAGTTTTAGAATCAAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTTAGAAACAACAATTCAAGCCGTTTTGGGAAATTTGTTGAGATCCAATTTGACAAGAAGGGAAGAATATCAGGAGCTGCCATCAGAACTTATCTTCTTGAGAGATCACGAGTTTGCCAAATATCAGACCCTGAGCGCAACTATCATTGCTTTTACCTTCTCTGTGCAGCTCCACCTCAGGAGAGAGAGAGGTATAAACTGGGAAATCCGAAATCATTTCACTATCTAAATCAATCAAATTGTTATGAGCTGGCTGGTGTGAATGATGCTCATGATTATCTTGCCACAAAGAGAGCCATGGATATTGTTGGAATAGGTGAACAAGAGCAGGATGCAATTTTCCGAGTTGTGGCTGCAATACTCCATCTTGGTAATGTTGACTTTGCAAAAGGAGAGGAGTCTGATTCATCATTTATAAAAGATGAAGAATCAAAATTTCATCTTCAAATGACAGCAGAGCTTCTCATGTGTGATCCCAATGCATTAGAAGATGCTCTTTGCAAGCGCATTATGATTACACGGGAGGAAATCATCAAGAGAAGTCTTGATCCGCTTGGTGCAACTGTTAGCAGGGATGGATTAGCCAAGACAATATATTCTCGTTTGTTTGACTGGTTGGTAGGTAAAATCAATGTTTCCATTGGGCAAGATCATGGCTCGGAATATCTGATCGGAGTACTTGATATTTATGGTTTTGAAAGCTTTAAAACAAATAGTTTTGAGCAATTCTGCATCAATTACACAAATGAAAAGCTGCAGCAACACTTCAACCAGCACGTATTCAAGATGGAGCAAGAAGAATATGTCAAAGAGGAAATTGATTGGAGCTACATAGAATTTGTTGATAATCAAGATGTCCTTGATCTAATCGAGAAGGTTCAATTTTTTCTTCTTAACTATGCTCTTGGAGTTCAAAGATGCCACTCACAACTATCCGTCTCTGGCATAGCCTCTAATTCTTTGTGCCTTTGCAGAAACCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGACAAAAATAAAGATTATGTGGTCGCTGAACATCAAGATTTGTTAATTGCTTCAAAATGTTCTTTTGTATCTGGCCTTTTCCCTCCTCCTGAGGAGGCGACCAAATCATCAAAGTTTTCTTCAATTGGCTCTCGGTTTAAGTTACAACTACAGCAGTTGATGGAAACATTAAATTCAACCGAACCCCATTATATAAGATGCGTGAAGCCCAATACTGTCCTACAACCTGCCATATTTGAGAATGCTACTGTTATGCAACAATTACGTCATGGAGGTGTTTTGGAGGCTGTTAGAATTAAATGTGCAGGATACCCTACTCATAGAACATTTTCCGAATTTTTATCTCGATTTGGAATTCTTGCACCCGAGGTATTGGAAGGGGACTACGAAGAGATGGTAGCATGCAGGAAGATTCTAGAGAAGACAGGACTTGAAGGTTATCTGATAGGGAAATCAAAACTTTTCCTAAGAGGTAGTCTGATGGCTGAACTAGATGCACAAAGAACAAGAGTATATAGTGGAGCTGCCACAGTTATACAGAAGCATATCAAATCTCGAATTGAACGTAAAAAGTACATTCATATGCGAAGAAGTTGCACTCGTGTACAGTCATATTGGAGAGGTGTTCTTGCTCGTGAGTCATATGAAAGTAGGAGAAGAGAATCAGCTGCCCTCAAAATTCAAAGGAATAGTCTTGCATTTATTGCCAGGAGCATCCATATTAAAACAAGGCTCGCTGTAGTTGTTCTTCAGGCTGGTATACGAGCAATGGTTGCTCGGAGTGAATACAGACGTAGGAGGCAGGTTAACGCTGCTGCAATAGTTATTCAATCTTATTGGCGTCAGTATTTGAAGTCTAAGATGGTTGGAAATCCATCAACCGGTTCACAATGCGGATTGAACTCAAGAACTGCTGGTGAAGGTCTTAAGAAGCAAAGGATGGCTGACTCGGAAGAAAGAGAGGAGGGTCTTACCTTGCCTGCGTTGCTCAACAGCAGGACAGATGCCATTGATGAAACAATTGAAATGATTGCCAAGGAAAACCGTGTTTCTCCAAAAGAAATAGAAGAAGCATACTTTATTATTAAAGAGCCCGGTAGTCGAGTTGAAGAAGCAGAATCTATGGTCACTCTCAGAGCAGAAGTGGCTAATCTAAAGGCCATGTTGCAGGCTGAAAGACACAGAGCTAATGAGTTTGAAAGGAAGTATATTGCAACGCTGAAAATAAATGCAGAAGGATGTAGAAGACTAAAAGAAAACGAAAGGATGGTGCGTCAACTTCAGGACTGCATAAGCAGGATGATACATGGCTTGTCAAACCAAATCACGGAGATGAAAATGATCATGTGTACTCCTCCTAGGCCAGATGCATCTAGTTCTATTCCAAACAGGGTTCCGACGGATGCCACATCTAGTTGCTCTTATTCATCGTCAGAAGACTTCACCTTTCCTGTTCCAAGATCTGACAATGACAGGGAAGGGGGATTCTCTGACTACTTCTAA | 3312 | 41.7 | MRGGDKKSGLKFAVMAVLLLLIAIEEAGVATVTARPIRDSSESYAHVRVATFRTFILGVGMDNPVNIVVGSHIWVGDIESVWIDGLVLNIIGEDAEIQTSDGRQVVVKMSNLYPRDAEAPATGIDDMTRMSYLNEPGLLHNLAIRYAINEIYTYTGNILIAINPFQSISNLYDPCVMEQYKGAPVGELKPHVFAIADVAYRAMITNGKSNSILVSGESGAGKTETTKMLMCYLAFLGGKAASEGRSVQQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQERERYKLGNPKSFHYLNQSNCYELAGVNDAHDYLATKRAMDIVGIGEQEQDAIFRVVAAILHLGNVDFAKGEESDSSFIKDEESKFHLQMTAELLMCDPNALEDALCKRIMITREEIIKRSLDPLGATVSRDGLAKTIYSRLFDWLVGKINVSIGQDHGSEYLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYVKEEIDWSYIEFVDNQDVLDLIEKVQFFLLNYALGVQRCHSQLSVSGIASNSLCLCRNQVESLLFLMKLDKNKDYVVAEHQDLLIASKCSFVSGLFPPPEEATKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNTVLQPAIFENATVMQQLRHGGVLEAVRIKCAGYPTHRTFSEFLSRFGILAPEVLEGDYEEMVACRKILEKTGLEGYLIGKSKLFLRGSLMAELDAQRTRVYSGAATVIQKHIKSRIERKKYIHMRRSCTRVQSYWRGVLARESYESRRRESAALKIQRNSLAFIARSIHIKTRLAVVVLQAGIRAMVARSEYRRRRQVNAAAIVIQSYWRQYLKSKMVGNPSTGSQCGLNSRTAGEGLKKQRMADSEEREEGLTLPALLNSRTDAIDETIEMIAKENRVSPKEIEEAYFIIKEPGSRVEEAESMVTLRAEVANLKAMLQAERHRANEFERKYIATLKINAEGCRRLKENERMVRQLQDCISRMIHGLSNQITEMKMIMCTPPRPDASSSIPNRVPTDATSSCSYSSSEDFTFPVPRSDNDREGGFSDYF | 1103 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 9335875 | 9357303 | + | Carg11498-RA | Car17g01227 | 165599 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car17g01227 | 1103 | MobiDBLite | consensus disorder prediction | 1059 | 1087 | - | - | |
Car17g01227 | 1103 | ProSiteProfiles | Myosin motor domain profile. | 122 | 772 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car17g01227 | 1103 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 68 | 117 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Car17g01227 | 1103 | ProSiteProfiles | IQ motif profile. | 775 | 804 | IPR000048 | GO:0005515 | |
Car17g01227 | 1103 | MobiDBLite | consensus disorder prediction | 897 | 925 | - | - | |
Car17g01227 | 1103 | Pfam | IQ calmodulin-binding motif | 874 | 887 | IPR000048 | GO:0005515 | |
Car17g01227 | 1103 | Pfam | IQ calmodulin-binding motif | 799 | 818 | IPR000048 | GO:0005515 | |
Car17g01227 | 1103 | Pfam | IQ calmodulin-binding motif | 849 | 867 | IPR000048 | GO:0005515 | |
Car17g01227 | 1103 | MobiDBLite | consensus disorder prediction | 1057 | 1103 | - | - | |
Car17g01227 | 1103 | ProSiteProfiles | IQ motif profile. | 846 | 875 | IPR000048 | GO:0005515 | |
Car17g01227 | 1103 | Pfam | Myosin head (motor domain) | 125 | 559 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car17g01227 | 1103 | Pfam | Myosin head (motor domain) | 603 | 760 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car17g01227 | 1103 | Coils | Coil | 978 | 1005 | - | - | |
Car17g01227 | 1103 | MobiDBLite | consensus disorder prediction | 1088 | 1103 | - | - | |
Car17g01227 | 1103 | ProSiteProfiles | IQ motif profile. | 798 | 827 | IPR000048 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car17g01227 | Car-Chr17:9335875 | Car11g00596 | Car-Chr11:3231929 | 0 | dispersed | |
Car17g01227 | Car-Chr17:9335875 | Car08g00246 | Car-Chr8:1546369 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car17g01227 | K10357 | - | mnt:21393089 | 1240.71 |