Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01260 ATGAAGTTGCACCTTAAACCTTTGCAATGTGCTTCTACGATGTTCGTCACAAATCGAACCAACAAACGTCTGAAGCTCATTTGCATAGCAAGAGTAGAATCGAACAAAATGGATACCGATATCTTTATTATGCGCTTCAACATGACGGAGAAGATCATCGTCGATAATGGTGTAATGTACACTTCGCTTGTGTGTGTATTTGTTAACTCGGGATACTTGCAGGCTTCTACTACCGGTCTTGTTGGAGTTGGATCGCTTGTTTGGTTGGAGGATTCTGAAGAAGCTTGGATAGAGGGTGAAGTGTTAGAAGTTCGTGGTGAAGAAATTAAGGTCCTATGCACCTCAGGGAAAACGGTTGCAGTTAAAGCAGCTAATGTCTACCCGAAAGATTCCGAAGTGCCACCTTGTGGTGTGGATGACATGACCAAGTTGGCTTACTTGCACGAACCCGGGACTTATACAGGGAACATATTGATTGCTGTAAACCCTTTTACGAGGTTACCCCATCTGTATGATAGCTATATGATGGCACAATATAAAGGGGCCGCACTCGGTGAGCTGAGTCCACATCCGTTTGCAATTGCAGATGCTGCCTACAGACTTATGGTCAATGAGAAAAAAAGTCAATCCATATTGGTCAGTGGTGAAAGTGGAGCTGGAAAGACGGAAAGTACAAAGTTGCTTATGCGTTATCTTGCGTATATGGGAGGGAGAGCTGCTGCCGAGGGGAGGTCAGTTGAGCAGCAAGTTCTCGAGTCAAATCCTGTTTTAGAAGCATTTGGGAATGCGAAAACTGTTCGGAACAACAACTCAAGTCGTTTCGGTAAGTTTGTGGAGATCCAATTTGACCAAGGGGGAAGAATATCAGGAGCTGCTATCAGAACTTACTTGCTCGAAAGATCTCGTGTTTGTCAGGTGTCCGATCCAGAGAGAAACTATCATTGCTTCTACATGCTTTGTGCTGGACCGCCTGAGGATGTCAAGAAGTATAAATTGGAAAACCCAAGAAGTTTCCATTATCTAAATCAATCAAACTGCTATGAGTTGGATGAAATTGATGATGCCAAAGAATATATTGCAACAAGAAAAGCAATGGAAGTCGTTGGGATAAGTTCGGACGAGCAGGATGGAATATTTCGTGTTGTAGCTGCGATTCTTCATCTAGGAAACATTGAATTCGCAAAGGGGAAGGAGGCCGATTCTTCCGTTCCGAAAGATGAAAAATCTTGGTTCCATCTTAGAACCGCTGCGGAGCTTTTCATGTGTGATGAGAAGGCCTTGGAAGACTCTCTCTGCAAACGTGTAATCGTCACTCGTGATGAGAATATCACAAAGTGGCTGGATCCAACTGCTGCAGCCCTTAGCAGAGATGCTTTGGCAAAAATTGTATACTCAAGATTGTTTGACTGGCTGGTAGACAAAATTAATAATTCGATTGGACAGGATCCCGATTCGAAGTTCTTGATTGGAGTGCTGGATATCTATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGCATCAACTTGACTAATGAAAAGCTTCAGCAGCATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAAGAGTATACAAAAGAGGAAATTGATTGGAGCTATATTGATTTTGTTGATAATCAAGACATCCTTGATCTCATTGAAAAGAAACCTGGTGGTATTATTGCCCTTCTGGATGAAGCATGTATGTTCCCCAGATCAACTCATGAAACATTTGCTCAAAAGTTGTATCAAACGTTCAAAAATCATAAACGCTTCAGCAAACCAAAATTATCCCGGAGTGACTTCACGATTGCTCATTATGCTGGTGATGTCACCTATCAAACTGATTTATTTCTGGACAAAAATAAGGACTATGTTGTTGCTGAACACCAAGCGCTCTTGAGCGCGTCCAAATGCTTCTTTGTGTCACGTTTGTTTCCTCAATTAGCTGAAGAATCATCCAAATCTTCGAAATTCTCATCAATAGGTTCCCGTTTCAAGCTACAATTAGTATCACTGCTGGAAACTCTAAGTGCTACCGAGCCGCATTACATTCGATGTGTAAAGCCCAATAATCTTCTAAAGCCTTCTATCTTCGAGAATAAGAATATATTGCAACAATTACGATGTGGGGGAGTCATGGAGGCAATTAGGATAAGTTGTGCCGGGTTTCCAACGAGGAAAACATTTGACGAATTTGTTGACCGATTCGGACTCCTTGCACCTGAAGTTTTGGATGGGAGCTCTGATGAAGTGACTGCTTGCAAGAGGCTTCTAGAGAAGGTCGGACTTAAAGGATACCAGATTGGTAAGACAAAAGTGTTTCTTAGAGCCGGTCAGATGGCTGAACTCGATGCACTCAGGACTGAGATCTTAGGGAGATCAGCAAGTATTATTCAGCGGAAAGTTCGTTCTTATCTGGCTCGTAGAAGCTTTGTATCGCTTCGGAGGTCAGCTATACATCTGCAGTCTGCGTGTAGAGGACAACTCGCTCGAGAAGTATTTGAGGGCATGAGGAGAGAAGCTTCTTCTTTAATGATTCAAAGGAATTTGCGCATGCATCTCTGCAGGAAAGCTTACAAAGAAAAGTACTCGTCAGCCGTTTCTATTCAAACTGGAATGCGTGGAATGGCTGCTCGCAATGAGCTGCGCTTCAGACGGCGATCTAAAGCAGCAATTGTTATCCAGAGCTATTGTCGACGATATTTGGCTCAGCTGCACTATAAGAGGTTAAAGAAAGCAGCAATCACCACTCAATCCATATGGCGAGGACGAGTTGCTCGTAAGGAACTACGGAAGCTGAAGATGGCTGCAAGGGAAACAGGAGCTCTTCAAGCTGCGAAAAATAAATTGGAAAAGCAAGTCGAAGAATTAACATGGAGACTGCAGTTGGAGAAGCGTATGAGGGCTGACTTGGAAGAAGCTAAGACCCAAGAAAATGAGAAGCTGCAATCTGCTTTGCAAGATATGCAGCTTCAGTTGAAAGAAACAAAAGCAATGTTTGAGAAGGAACGTGAAGCTGCGAAAAAGGCGGCGGATATTGTTCCGATTGTGAAGGAGGTTCCAGTTCTTGATAATGCAGCGATTGAGAAAATTTCGAGTGAAAATGAAAAGCTCAAGGCTTTGGTAAGTTCACTGGAAAAGAAAATTGATGAAACAGAGAAAAAGTACGAAGAGGCGAACAGAGTTAGTGAAGAAAGGTTGAAGCAAGCATCAGACGCTGAAACAAAAATCATTCAATTAAAGACTGCTATGCAGAGGCTTGAAGAAAAATTCTCAACTATTGAATCTGAAAATCAGCTTCTTCGGCAGCAGACCTTCATGAAGACACCAGTAAAAAAAATGGCTGACCATCTTCCTATTGCAGCAGCAGAGAAATTGGAGAACGGTAACCATTTGATTGAAGATAACAGAACTGATGAGCAATTTGTAACGCCCGTGAAATCACTGAAGAGAATTAGCTCAGAATCTGAAATTAAGTTGAGTAGATCACATTTTGAACATCAACAAGAGAATGTTGATGCTCTTATCAGTTGTGTTATGAACAACACTGGGTTTAGTAATGGGAAGCCTATAGCTGCATTTACCATTTATAAATGTCTTCTTCACTGGAAATCTTTTGAAGCGGAAAAAACAAGCGTATTTGATCGACTAATTCAGATGATCGGATCCGCAATAGAGAATCAAGATAACAATGATCATCTAGCCTATTGGTTGTCGAACACATCCGCGCTACTGTTCTTGCTTCAACGAAGCTTGAAAGCTGCCGGTGCTCCCCGAAAACCGCCACCGTCAACGTCCTTATTTGGAAGGATGACTATGGGCTTCCGTTCGTCTCCTTCTTCCAACAGTCTTGGATCTGCACTTAAGGTAGTTCGCCAAGTGGATGCTAAATATCCAGCTTTGCTATTCAAGCAGCAGCTGACAGCGTATGTCGAAAAAATATTCGGAATTATCCGAGATAACTTGAAGAAGGAGTTGACAACATTGCTTTCGTCGTGTATCCAAGCACCAAGAACATCGAAAGGAGTGTTACGATCGGGACGATCATTTGGGAAAGATACTCAAACAAATTACTGGCTGAGCATCATAGAACACCTTAACTTGCTTCTCTGTACATTGAAAGAAAATTTTGTTCCCCAAATTCTTATCCAGAATGTCTTTGTTCAAAACTTTTCGTATATTAATGTTCAACTCTTCAATAGCCTCCTTCTCCGACGAGAATGTTGTACGTTTAGCAATGGGGAATACGTTAAGTCCGGGTTAGCCGAGTTGGAGCTCTGGTGTTGCCAGGCAAAAGAGGAGTATGCTGGTGCTTCTTGGGATGAGCTTAAACACATAAGACAAGCTGTTGGCTTCTTGGTTATACATCAGAAATACAGAATTTCCTATGATGAAATCACCAATGATCTTTGCCCTATCCTGAGTGTCCAGCAGCTTTATAGAATATGTACGCTCTACTGGGACGACAACTACAACACTCGAAGCGTATCGCCCGGAGTAATATCCAGCATGAGAGTGCTCATGACAGAGGATTCCAACAATGCAGTTAGCAGTTCCTTCCTATTAGATGACAATTCCAGCATCCCCTTCTCGGTCGAAGACCTCTCGAACTCGCTGCAAGAGAAAGATTTCTCCGGCGTGAAGCCTGCTGACGAACTACTCGAGAACCCCGCCTTCCAATTTTTACACGAGTAA 4704 42.47 MKLHLKPLQCASTMFVTNRTNKRLKLICIARVESNKMDTDIFIMRFNMTEKIIVDNGVMYTSLVCVFVNSGYLQASTTGLVGVGSLVWLEDSEEAWIEGEVLEVRGEEIKVLCTSGKTVAVKAANVYPKDSEVPPCGVDDMTKLAYLHEPGTYTGNILIAVNPFTRLPHLYDSYMMAQYKGAALGELSPHPFAIADAAYRLMVNEKKSQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQGGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAGPPEDVKKYKLENPRSFHYLNQSNCYELDEIDDAKEYIATRKAMEVVGISSDEQDGIFRVVAAILHLGNIEFAKGKEADSSVPKDEKSWFHLRTAAELFMCDEKALEDSLCKRVIVTRDENITKWLDPTAAALSRDALAKIVYSRLFDWLVDKINNSIGQDPDSKFLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIDFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTIAHYAGDVTYQTDLFLDKNKDYVVAEHQALLSASKCFFVSRLFPQLAEESSKSSKFSSIGSRFKLQLVSLLETLSATEPHYIRCVKPNNLLKPSIFENKNILQQLRCGGVMEAIRISCAGFPTRKTFDEFVDRFGLLAPEVLDGSSDEVTACKRLLEKVGLKGYQIGKTKVFLRAGQMAELDALRTEILGRSASIIQRKVRSYLARRSFVSLRRSAIHLQSACRGQLAREVFEGMRREASSLMIQRNLRMHLCRKAYKEKYSSAVSIQTGMRGMAARNELRFRRRSKAAIVIQSYCRRYLAQLHYKRLKKAAITTQSIWRGRVARKELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRADLEEAKTQENEKLQSALQDMQLQLKETKAMFEKEREAAKKAADIVPIVKEVPVLDNAAIEKISSENEKLKALVSSLEKKIDETEKKYEEANRVSEERLKQASDAETKIIQLKTAMQRLEEKFSTIESENQLLRQQTFMKTPVKKMADHLPIAAAEKLENGNHLIEDNRTDEQFVTPVKSLKRISSESEIKLSRSHFEHQQENVDALISCVMNNTGFSNGKPIAAFTIYKCLLHWKSFEAEKTSVFDRLIQMIGSAIENQDNNDHLAYWLSNTSALLFLLQRSLKAAGAPRKPPPSTSLFGRMTMGFRSSPSSNSLGSALKVVRQVDAKYPALLFKQQLTAYVEKIFGIIRDNLKKELTTLLSSCIQAPRTSKGVLRSGRSFGKDTQTNYWLSIIEHLNLLLCTLKENFVPQILIQNVFVQNFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWCCQAKEEYAGASWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPGVISSMRVLMTEDSNNAVSSSFLLDDNSSIPFSVEDLSNSLQEKDFSGVKPADELLENPAFQFLHE 1567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9556230 9571755 - Carg11531-RA Car17g01260 165632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01260 1567 Coils Coil 936 1009 - -
Car17g01260 1567 ProSiteProfiles Dilute domain profile. 1218 1513 IPR002710 -
Car17g01260 1567 ProSiteProfiles IQ motif profile. 817 846 IPR000048 GO:0005515
Car17g01260 1567 ProSiteProfiles Myosin motor domain profile. 152 791 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car17g01260 1567 ProSiteProfiles IQ motif profile. 890 919 IPR000048 GO:0005515
Car17g01260 1567 ProSiteProfiles IQ motif profile. 865 894 IPR000048 GO:0005515
Car17g01260 1567 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 82 131 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car17g01260 1567 ProSiteProfiles IQ motif profile. 913 942 IPR000048 GO:0005515
Car17g01260 1567 Pfam Myosin N-terminal SH3-like domain 84 125 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car17g01260 1567 Pfam DIL domain 1389 1492 IPR002710 -
Car17g01260 1567 ProSiteProfiles IQ motif profile. 842 871 IPR000048 GO:0005515
Car17g01260 1567 Coils Coil 1031 1107 - -
Car17g01260 1567 Pfam IQ calmodulin-binding motif 845 863 IPR000048 GO:0005515
Car17g01260 1567 Pfam IQ calmodulin-binding motif 818 835 IPR000048 GO:0005515
Car17g01260 1567 Pfam IQ calmodulin-binding motif 915 934 IPR000048 GO:0005515
Car17g01260 1567 Pfam IQ calmodulin-binding motif 892 911 IPR000048 GO:0005515
Car17g01260 1567 Pfam IQ calmodulin-binding motif 796 814 IPR000048 GO:0005515
Car17g01260 1567 Pfam Myosin head (motor domain) 152 779 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car17g01260 1567 ProSiteProfiles IQ motif profile. 796 820 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00045 Car17g01260 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01101 Car-Chr6:8259248 Car17g01260 Car-Chr17:9556230 0 dispersed
Car10g00670 Car-Chr10:3442085 Car17g01260 Car-Chr17:9556230 0 dispersed
Car11g00596 Car-Chr11:3231929 Car17g01260 Car-Chr17:9556230 0 dispersed
Car17g01260 Car-Chr17:9556230 Car08g00045 Car-Chr8:251442 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01260 K10357 - csv:101208630 2791.91