Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car17g01260 | ATGAAGTTGCACCTTAAACCTTTGCAATGTGCTTCTACGATGTTCGTCACAAATCGAACCAACAAACGTCTGAAGCTCATTTGCATAGCAAGAGTAGAATCGAACAAAATGGATACCGATATCTTTATTATGCGCTTCAACATGACGGAGAAGATCATCGTCGATAATGGTGTAATGTACACTTCGCTTGTGTGTGTATTTGTTAACTCGGGATACTTGCAGGCTTCTACTACCGGTCTTGTTGGAGTTGGATCGCTTGTTTGGTTGGAGGATTCTGAAGAAGCTTGGATAGAGGGTGAAGTGTTAGAAGTTCGTGGTGAAGAAATTAAGGTCCTATGCACCTCAGGGAAAACGGTTGCAGTTAAAGCAGCTAATGTCTACCCGAAAGATTCCGAAGTGCCACCTTGTGGTGTGGATGACATGACCAAGTTGGCTTACTTGCACGAACCCGGGACTTATACAGGGAACATATTGATTGCTGTAAACCCTTTTACGAGGTTACCCCATCTGTATGATAGCTATATGATGGCACAATATAAAGGGGCCGCACTCGGTGAGCTGAGTCCACATCCGTTTGCAATTGCAGATGCTGCCTACAGACTTATGGTCAATGAGAAAAAAAGTCAATCCATATTGGTCAGTGGTGAAAGTGGAGCTGGAAAGACGGAAAGTACAAAGTTGCTTATGCGTTATCTTGCGTATATGGGAGGGAGAGCTGCTGCCGAGGGGAGGTCAGTTGAGCAGCAAGTTCTCGAGTCAAATCCTGTTTTAGAAGCATTTGGGAATGCGAAAACTGTTCGGAACAACAACTCAAGTCGTTTCGGTAAGTTTGTGGAGATCCAATTTGACCAAGGGGGAAGAATATCAGGAGCTGCTATCAGAACTTACTTGCTCGAAAGATCTCGTGTTTGTCAGGTGTCCGATCCAGAGAGAAACTATCATTGCTTCTACATGCTTTGTGCTGGACCGCCTGAGGATGTCAAGAAGTATAAATTGGAAAACCCAAGAAGTTTCCATTATCTAAATCAATCAAACTGCTATGAGTTGGATGAAATTGATGATGCCAAAGAATATATTGCAACAAGAAAAGCAATGGAAGTCGTTGGGATAAGTTCGGACGAGCAGGATGGAATATTTCGTGTTGTAGCTGCGATTCTTCATCTAGGAAACATTGAATTCGCAAAGGGGAAGGAGGCCGATTCTTCCGTTCCGAAAGATGAAAAATCTTGGTTCCATCTTAGAACCGCTGCGGAGCTTTTCATGTGTGATGAGAAGGCCTTGGAAGACTCTCTCTGCAAACGTGTAATCGTCACTCGTGATGAGAATATCACAAAGTGGCTGGATCCAACTGCTGCAGCCCTTAGCAGAGATGCTTTGGCAAAAATTGTATACTCAAGATTGTTTGACTGGCTGGTAGACAAAATTAATAATTCGATTGGACAGGATCCCGATTCGAAGTTCTTGATTGGAGTGCTGGATATCTATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGCATCAACTTGACTAATGAAAAGCTTCAGCAGCATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAAGAGTATACAAAAGAGGAAATTGATTGGAGCTATATTGATTTTGTTGATAATCAAGACATCCTTGATCTCATTGAAAAGAAACCTGGTGGTATTATTGCCCTTCTGGATGAAGCATGTATGTTCCCCAGATCAACTCATGAAACATTTGCTCAAAAGTTGTATCAAACGTTCAAAAATCATAAACGCTTCAGCAAACCAAAATTATCCCGGAGTGACTTCACGATTGCTCATTATGCTGGTGATGTCACCTATCAAACTGATTTATTTCTGGACAAAAATAAGGACTATGTTGTTGCTGAACACCAAGCGCTCTTGAGCGCGTCCAAATGCTTCTTTGTGTCACGTTTGTTTCCTCAATTAGCTGAAGAATCATCCAAATCTTCGAAATTCTCATCAATAGGTTCCCGTTTCAAGCTACAATTAGTATCACTGCTGGAAACTCTAAGTGCTACCGAGCCGCATTACATTCGATGTGTAAAGCCCAATAATCTTCTAAAGCCTTCTATCTTCGAGAATAAGAATATATTGCAACAATTACGATGTGGGGGAGTCATGGAGGCAATTAGGATAAGTTGTGCCGGGTTTCCAACGAGGAAAACATTTGACGAATTTGTTGACCGATTCGGACTCCTTGCACCTGAAGTTTTGGATGGGAGCTCTGATGAAGTGACTGCTTGCAAGAGGCTTCTAGAGAAGGTCGGACTTAAAGGATACCAGATTGGTAAGACAAAAGTGTTTCTTAGAGCCGGTCAGATGGCTGAACTCGATGCACTCAGGACTGAGATCTTAGGGAGATCAGCAAGTATTATTCAGCGGAAAGTTCGTTCTTATCTGGCTCGTAGAAGCTTTGTATCGCTTCGGAGGTCAGCTATACATCTGCAGTCTGCGTGTAGAGGACAACTCGCTCGAGAAGTATTTGAGGGCATGAGGAGAGAAGCTTCTTCTTTAATGATTCAAAGGAATTTGCGCATGCATCTCTGCAGGAAAGCTTACAAAGAAAAGTACTCGTCAGCCGTTTCTATTCAAACTGGAATGCGTGGAATGGCTGCTCGCAATGAGCTGCGCTTCAGACGGCGATCTAAAGCAGCAATTGTTATCCAGAGCTATTGTCGACGATATTTGGCTCAGCTGCACTATAAGAGGTTAAAGAAAGCAGCAATCACCACTCAATCCATATGGCGAGGACGAGTTGCTCGTAAGGAACTACGGAAGCTGAAGATGGCTGCAAGGGAAACAGGAGCTCTTCAAGCTGCGAAAAATAAATTGGAAAAGCAAGTCGAAGAATTAACATGGAGACTGCAGTTGGAGAAGCGTATGAGGGCTGACTTGGAAGAAGCTAAGACCCAAGAAAATGAGAAGCTGCAATCTGCTTTGCAAGATATGCAGCTTCAGTTGAAAGAAACAAAAGCAATGTTTGAGAAGGAACGTGAAGCTGCGAAAAAGGCGGCGGATATTGTTCCGATTGTGAAGGAGGTTCCAGTTCTTGATAATGCAGCGATTGAGAAAATTTCGAGTGAAAATGAAAAGCTCAAGGCTTTGGTAAGTTCACTGGAAAAGAAAATTGATGAAACAGAGAAAAAGTACGAAGAGGCGAACAGAGTTAGTGAAGAAAGGTTGAAGCAAGCATCAGACGCTGAAACAAAAATCATTCAATTAAAGACTGCTATGCAGAGGCTTGAAGAAAAATTCTCAACTATTGAATCTGAAAATCAGCTTCTTCGGCAGCAGACCTTCATGAAGACACCAGTAAAAAAAATGGCTGACCATCTTCCTATTGCAGCAGCAGAGAAATTGGAGAACGGTAACCATTTGATTGAAGATAACAGAACTGATGAGCAATTTGTAACGCCCGTGAAATCACTGAAGAGAATTAGCTCAGAATCTGAAATTAAGTTGAGTAGATCACATTTTGAACATCAACAAGAGAATGTTGATGCTCTTATCAGTTGTGTTATGAACAACACTGGGTTTAGTAATGGGAAGCCTATAGCTGCATTTACCATTTATAAATGTCTTCTTCACTGGAAATCTTTTGAAGCGGAAAAAACAAGCGTATTTGATCGACTAATTCAGATGATCGGATCCGCAATAGAGAATCAAGATAACAATGATCATCTAGCCTATTGGTTGTCGAACACATCCGCGCTACTGTTCTTGCTTCAACGAAGCTTGAAAGCTGCCGGTGCTCCCCGAAAACCGCCACCGTCAACGTCCTTATTTGGAAGGATGACTATGGGCTTCCGTTCGTCTCCTTCTTCCAACAGTCTTGGATCTGCACTTAAGGTAGTTCGCCAAGTGGATGCTAAATATCCAGCTTTGCTATTCAAGCAGCAGCTGACAGCGTATGTCGAAAAAATATTCGGAATTATCCGAGATAACTTGAAGAAGGAGTTGACAACATTGCTTTCGTCGTGTATCCAAGCACCAAGAACATCGAAAGGAGTGTTACGATCGGGACGATCATTTGGGAAAGATACTCAAACAAATTACTGGCTGAGCATCATAGAACACCTTAACTTGCTTCTCTGTACATTGAAAGAAAATTTTGTTCCCCAAATTCTTATCCAGAATGTCTTTGTTCAAAACTTTTCGTATATTAATGTTCAACTCTTCAATAGCCTCCTTCTCCGACGAGAATGTTGTACGTTTAGCAATGGGGAATACGTTAAGTCCGGGTTAGCCGAGTTGGAGCTCTGGTGTTGCCAGGCAAAAGAGGAGTATGCTGGTGCTTCTTGGGATGAGCTTAAACACATAAGACAAGCTGTTGGCTTCTTGGTTATACATCAGAAATACAGAATTTCCTATGATGAAATCACCAATGATCTTTGCCCTATCCTGAGTGTCCAGCAGCTTTATAGAATATGTACGCTCTACTGGGACGACAACTACAACACTCGAAGCGTATCGCCCGGAGTAATATCCAGCATGAGAGTGCTCATGACAGAGGATTCCAACAATGCAGTTAGCAGTTCCTTCCTATTAGATGACAATTCCAGCATCCCCTTCTCGGTCGAAGACCTCTCGAACTCGCTGCAAGAGAAAGATTTCTCCGGCGTGAAGCCTGCTGACGAACTACTCGAGAACCCCGCCTTCCAATTTTTACACGAGTAA | 4704 | 42.47 | MKLHLKPLQCASTMFVTNRTNKRLKLICIARVESNKMDTDIFIMRFNMTEKIIVDNGVMYTSLVCVFVNSGYLQASTTGLVGVGSLVWLEDSEEAWIEGEVLEVRGEEIKVLCTSGKTVAVKAANVYPKDSEVPPCGVDDMTKLAYLHEPGTYTGNILIAVNPFTRLPHLYDSYMMAQYKGAALGELSPHPFAIADAAYRLMVNEKKSQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQGGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAGPPEDVKKYKLENPRSFHYLNQSNCYELDEIDDAKEYIATRKAMEVVGISSDEQDGIFRVVAAILHLGNIEFAKGKEADSSVPKDEKSWFHLRTAAELFMCDEKALEDSLCKRVIVTRDENITKWLDPTAAALSRDALAKIVYSRLFDWLVDKINNSIGQDPDSKFLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIDFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTIAHYAGDVTYQTDLFLDKNKDYVVAEHQALLSASKCFFVSRLFPQLAEESSKSSKFSSIGSRFKLQLVSLLETLSATEPHYIRCVKPNNLLKPSIFENKNILQQLRCGGVMEAIRISCAGFPTRKTFDEFVDRFGLLAPEVLDGSSDEVTACKRLLEKVGLKGYQIGKTKVFLRAGQMAELDALRTEILGRSASIIQRKVRSYLARRSFVSLRRSAIHLQSACRGQLAREVFEGMRREASSLMIQRNLRMHLCRKAYKEKYSSAVSIQTGMRGMAARNELRFRRRSKAAIVIQSYCRRYLAQLHYKRLKKAAITTQSIWRGRVARKELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRADLEEAKTQENEKLQSALQDMQLQLKETKAMFEKEREAAKKAADIVPIVKEVPVLDNAAIEKISSENEKLKALVSSLEKKIDETEKKYEEANRVSEERLKQASDAETKIIQLKTAMQRLEEKFSTIESENQLLRQQTFMKTPVKKMADHLPIAAAEKLENGNHLIEDNRTDEQFVTPVKSLKRISSESEIKLSRSHFEHQQENVDALISCVMNNTGFSNGKPIAAFTIYKCLLHWKSFEAEKTSVFDRLIQMIGSAIENQDNNDHLAYWLSNTSALLFLLQRSLKAAGAPRKPPPSTSLFGRMTMGFRSSPSSNSLGSALKVVRQVDAKYPALLFKQQLTAYVEKIFGIIRDNLKKELTTLLSSCIQAPRTSKGVLRSGRSFGKDTQTNYWLSIIEHLNLLLCTLKENFVPQILIQNVFVQNFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWCCQAKEEYAGASWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPGVISSMRVLMTEDSNNAVSSSFLLDDNSSIPFSVEDLSNSLQEKDFSGVKPADELLENPAFQFLHE | 1567 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 9556230 | 9571755 | - | Carg11531-RA | Car17g01260 | 165632 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car17g01260 | 1567 | Coils | Coil | 936 | 1009 | - | - | |
Car17g01260 | 1567 | ProSiteProfiles | Dilute domain profile. | 1218 | 1513 | IPR002710 | - | |
Car17g01260 | 1567 | ProSiteProfiles | IQ motif profile. | 817 | 846 | IPR000048 | GO:0005515 | |
Car17g01260 | 1567 | ProSiteProfiles | Myosin motor domain profile. | 152 | 791 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car17g01260 | 1567 | ProSiteProfiles | IQ motif profile. | 890 | 919 | IPR000048 | GO:0005515 | |
Car17g01260 | 1567 | ProSiteProfiles | IQ motif profile. | 865 | 894 | IPR000048 | GO:0005515 | |
Car17g01260 | 1567 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 82 | 131 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Car17g01260 | 1567 | ProSiteProfiles | IQ motif profile. | 913 | 942 | IPR000048 | GO:0005515 | |
Car17g01260 | 1567 | Pfam | Myosin N-terminal SH3-like domain | 84 | 125 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Car17g01260 | 1567 | Pfam | DIL domain | 1389 | 1492 | IPR002710 | - | |
Car17g01260 | 1567 | ProSiteProfiles | IQ motif profile. | 842 | 871 | IPR000048 | GO:0005515 | |
Car17g01260 | 1567 | Coils | Coil | 1031 | 1107 | - | - | |
Car17g01260 | 1567 | Pfam | IQ calmodulin-binding motif | 845 | 863 | IPR000048 | GO:0005515 | |
Car17g01260 | 1567 | Pfam | IQ calmodulin-binding motif | 818 | 835 | IPR000048 | GO:0005515 | |
Car17g01260 | 1567 | Pfam | IQ calmodulin-binding motif | 915 | 934 | IPR000048 | GO:0005515 | |
Car17g01260 | 1567 | Pfam | IQ calmodulin-binding motif | 892 | 911 | IPR000048 | GO:0005515 | |
Car17g01260 | 1567 | Pfam | IQ calmodulin-binding motif | 796 | 814 | IPR000048 | GO:0005515 | |
Car17g01260 | 1567 | Pfam | Myosin head (motor domain) | 152 | 779 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car17g01260 | 1567 | ProSiteProfiles | IQ motif profile. | 796 | 820 | IPR000048 | GO:0005515 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car08g00045 | Car17g01260 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car06g01101 | Car-Chr6:8259248 | Car17g01260 | Car-Chr17:9556230 | 0 | dispersed | |
Car10g00670 | Car-Chr10:3442085 | Car17g01260 | Car-Chr17:9556230 | 0 | dispersed | |
Car11g00596 | Car-Chr11:3231929 | Car17g01260 | Car-Chr17:9556230 | 0 | dispersed | |
Car17g01260 | Car-Chr17:9556230 | Car08g00045 | Car-Chr8:251442 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car17g01260 | K10357 | - | csv:101208630 | 2791.91 |