Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01279 ATGGATAGTTGGGTGACAGCACTTGGCGCCCTCGCCATCGGCGCAGTCTTCCATTTTGTGTTGAGTCGTATCTTGTGGCGTAAACAAAAGCTCCCTCCTGGTCCCCTTGCCTTGCCGCTCATAGGCAACCCCATATGGCTCTTCAAGCCACTTTCCGAGCTGGAAGCCACCCTCCGCCATTACCATTCCAAATACGGTCCAGTAATCACCCTCCACTTCGGCAACACTCCTTCCATTTTCATCGCCAGCCACTCTGCTGCTCACCAGGCCTTGGTTCAAAACGGCGCTGTCTTCGCAGACCGCTTCCCTATCATGGAGACCGTTAAAATCATCACCAGCAACCAACACAACATCAGCACCTCCTTCTACGGCCCCACCTGGCGCATCCTCCGCCGCAATCTTACCTCCGAGCTCCTCCATCCATCTCGCTTGAAGGCTCACTCCCCTTCTCGCAAATGGGTCTTGGATGATCTACTCCATCGCCTCATCCAACATTCCAACCCCACCTCCCCTGCCCAATCCCCTGTTCCTGTAACAGTCGTGGACCATCTTCGCCACGCCATGTTTAGCCTGGCTGCCGCTATGTGTTTTGGGGAGAAATTCGACGCCAAATTAATCAATGAAATACAAGAATCTCAACGTGGGGTTTTGTTGAACATCGGTAAATTCAATGATCTTAACTTCTGGCCTCCGAAATTGGGGAAAATTTTGTTCCGGAAGCGTTGGGAAGAGATTCGTCAGCTACGTAAGCGGCAAGACAATTTGCTACTTCCATTGATCAATGCAAGAAAGAAGATAGTCAAAGAGAAGGGCGGATCAGGTGCTGGGAATAAGAACCCGATTCCGTACGTTGATACTCTGTTTGATTTAGAAATTGCAGAGAACAACGACGAGAAGAGGAAGAGAAAATTGGTGGAAGATGAACTGATAACTTTATGCACAGAGTTCATCGACGCCATCACGGACACTACGGTGGTGTCATTGCAATGGATAATGGCGAATTTGGTGAAATACCCAGAAATTCAAGAGAAGCTGTTCAAGGAAATGAAAGAAGTGATGGGAGAGAGTGCGAAGGAGGAGATAGAAGAGGAGGATTTACAGAAGATGACATATCTGAAAGCCGTAGTGCTTGAAGGGCTACGGCGGCACCCGCCGGGGCATCTGCTGCTGCCTCATACAGTGACAGAGGACAGTGTTGTGGAGGGCGGATACAGGGTGCCAAAAGGAACGTCGGTGAACTTTATGGTTGCCGACATGGGTTGGGACCCGAAGGTGTGGCCGGATCCGATGGCGTTCAAGCCGGAGAGATTCTTGACGGATAGGTCGGAGGGTGGGGTTGAGGTGGAAGTTGATATCACAGGGAGTAAGGAAATAAAGATGATGCCGTTCGGGGCTGGGAGGAGGTTCTGCCCGGGATTCGCTTTGGGGTTGCTGCATTTGGAGTATTTCGTTGGGAATTTGGTGTGGAACTTCAAGTGGACGGCTGCCGGAGATGTTGATCTGTCTGAGAAGCTGGAATCTGCCGTCACCATGAAACAACCGCTGCTCTCCTACTTGTCGCCGAGGGCGGTTTCTAGTTAG 1581 51.04 MDSWVTALGALAIGAVFHFVLSRILWRKQKLPPGPLALPLIGNPIWLFKPLSELEATLRHYHSKYGPVITLHFGNTPSIFIASHSAAHQALVQNGAVFADRFPIMETVKIITSNQHNISTSFYGPTWRILRRNLTSELLHPSRLKAHSPSRKWVLDDLLHRLIQHSNPTSPAQSPVPVTVVDHLRHAMFSLAAAMCFGEKFDAKLINEIQESQRGVLLNIGKFNDLNFWPPKLGKILFRKRWEEIRQLRKRQDNLLLPLINARKKIVKEKGGSGAGNKNPIPYVDTLFDLEIAENNDEKRKRKLVEDELITLCTEFIDAITDTTVVSLQWIMANLVKYPEIQEKLFKEMKEVMGESAKEEIEEEDLQKMTYLKAVVLEGLRRHPPGHLLLPHTVTEDSVVEGGYRVPKGTSVNFMVADMGWDPKVWPDPMAFKPERFLTDRSEGGVEVEVDITGSKEIKMMPFGAGRRFCPGFALGLLHLEYFVGNLVWNFKWTAAGDVDLSEKLESAVTMKQPLLSYLSPRAVSS 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9697836 9699416 + Carg11550-RA Car17g01279 165651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01279 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Car17g01279 526 Pfam Cytochrome P450 32 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00328 Car-Chr2:2274731 Car17g01279 Car-Chr17:9697836 1.34E-147 dispersed
Car17g01279 Car-Chr17:9697836 Car20g00800 Car-Chr20:4842262 0 dispersed
Car17g01279 Car-Chr17:9697836 Car02g00902 Car-Chr2:6424022 1.04E-166 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01279 K24184 - csv:101204774 791.186