Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01280 ATGGAAACCAGCAGCTATGTTGCAGCGTTGATTACTTTCTTGGCTGTGGGTTCCATTTTTTTGTTGCAGAAAAGAAAAAACAGAGCCAAAAATCTCCCGCCGACTCCCTGGGCTCTGCCCATCCTGGGTCATCTTCATCTACTCAAGCACCCTGTCCACAGAACTTTACAGTCCCTCGCCCAAAAACACGGCCCAATTTTCACTCTCCGCCTCGGCTCCCGTCTCGCCGTCGTCGTATCATCGGCACCAGCCGTCGAAGAATGCTTTACCACAAACGACATCGTTTTCGCTAACCGCCCTCAATTCGTTTCCGGCATGTACCTCAGCTACGGCAACACCACGATGGGGGCTGCCCCGTACGGCGATCACTGGCGCAATCTAAGGCGCTTGAGCTCCACAGAAATCTTGTCGTCGATTCGCCTCAACATGTCGGCCGGTATCCGAAAGGAAGAAGTTAACATTTTACTCCGCAAATTGTATCAATTTTCGAGGCATGATTTTGGGAAAGTGAAATTGAAAACCCTGTTTTCGGAGCTGACATTCAACATAATTATGAGAATGGTGGCCGGAAAACGGTATTACGGCGACGAAGTGACGGAATTGGAAGAGGCGAAAGAGTTCCGACAAATTATGGAGACGTCGTTTCGATTGGGGTCGTACCCTGGTGATTTCTTACCGTTCCTGAAGTGGGTTGATCGGCAATACCCCAAAAGGATGAAGAGTCTGGGCAAAGCCATAGATTCGTTGCTGCAGAATTTGGTGGATGAACACCGGAGATATCAAAATGAAGGGAAAAAGCTTGATACCATGATTAGCCATCTGCTCTGTTTGCAGGAATCTCAGCCCGAGTATTACTCGGATGAAATTATCAAAGGCCTCATCGTTACAATTTTAACAGCAGCGACGGAAACATCGTCTGTGACGATAGAATGGGCAATGTCCAATCTACTCAACCATCCAGAGGCATTGGACAAGGCCAGAGCTGAACTTGACGCACAGATTGGGCAAGATCGGTTACTGGAAGAAGAAGACATCCCCAATCTGCCATACCTCCAGAACGTGATCTCTGAGACACTGCGCCTATACCCAGCAGCTCCCCTCTTGGCGCCACATTTTTCATCCGAGAGTTGTTCTCTGGGGGGATACCATATTCCTGCTGGCACTACCTTGTTGGTGAATGCGTGGGCGGTGCAAAGGGATCCCGAAGTTTGGGAGGACCCGACAAGGTTTAAACCTGAGAGGTTCGAGAGCGGGGGAGTGGCTGCCAACGCTTACAAATTCTTGCCGTTTGGATTGGGGAGGAGGGCTTGTCCTGGGATGGGCATGGCCAACCGTGTGGTGGGCTTGGCTTTGGGGTCGCTGATTCAGAGCTTTGAGTGGAAGAGGGTGAGTGATGAGGAATTGGACATGACTGAAAGCCAAGGGATCTCTATGTATAAAGTTGAGCCATTGGAGGCCTTATGTAGAGCTCGCCCCATCATCAAAAACCTTGCATTTCATTGA 1503 49.83 METSSYVAALITFLAVGSIFLLQKRKNRAKNLPPTPWALPILGHLHLLKHPVHRTLQSLAQKHGPIFTLRLGSRLAVVVSSAPAVEECFTTNDIVFANRPQFVSGMYLSYGNTTMGAAPYGDHWRNLRRLSSTEILSSIRLNMSAGIRKEEVNILLRKLYQFSRHDFGKVKLKTLFSELTFNIIMRMVAGKRYYGDEVTELEEAKEFRQIMETSFRLGSYPGDFLPFLKWVDRQYPKRMKSLGKAIDSLLQNLVDEHRRYQNEGKKLDTMISHLLCLQESQPEYYSDEIIKGLIVTILTAATETSSVTIEWAMSNLLNHPEALDKARAELDAQIGQDRLLEEEDIPNLPYLQNVISETLRLYPAAPLLAPHFSSESCSLGGYHIPAGTTLLVNAWAVQRDPEVWEDPTRFKPERFESGGVAANAYKFLPFGLGRRACPGMGMANRVVGLALGSLIQSFEWKRVSDEELDMTESQGISMYKVEPLEALCRARPIIKNLAFH 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9700159 9701735 - Carg11551-RA Car17g01280 165652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01280 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Car17g01280 500 Coils Coil 323 343 - -
Car17g01280 500 Pfam Cytochrome P450 33 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00856 Car-Chr3:6897855 Car17g01280 Car-Chr17:9700159 0 dispersed
Car03g00857 Car-Chr3:6900143 Car17g01280 Car-Chr17:9700159 0 dispersed
Car09g00162 Car-Chr9:765120 Car17g01280 Car-Chr17:9700159 7.63E-102 dispersed
Car09g00223 Car-Chr9:1265768 Car17g01280 Car-Chr17:9700159 8.73E-177 dispersed
Car09g00226 Car-Chr9:1274965 Car17g01280 Car-Chr17:9700159 6.30E-170 dispersed
Car17g01280 Car-Chr17:9700159 Car20g00833 Car-Chr20:5636520 5.98E-178 dispersed
Car11g00908 Car-Chr11:5759526 Car17g01280 Car-Chr17:9700159 1.61E-88 transposed
Car14g00459 Car-Chr14:2407767 Car17g01280 Car-Chr17:9700159 1.14E-89 transposed
Car14g01047 Car-Chr14:9202212 Car17g01280 Car-Chr17:9700159 1.09E-110 transposed
Car15g01272 Car-Chr15:9938874 Car17g01280 Car-Chr17:9700159 8.84E-74 transposed
Car17g01280 Car-Chr17:9700159 Car08g00029 Car-Chr8:139176 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01280 K13260 K25488 csv:101207828 773.467