Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01283 ATGGCTGATGGTCATGAAACTGATAAGAACATTGAAATATGGAAAATTAAGAAGTTGATTAAAGCACTTGAAGCTGCAAGAGGCAATGGGACTAGCATGATCTCTCTCATCATGCCTCCTCGTGATCAAATATCTCGTGTTACTAAGATGCTTGGTGATGAATTTGGAACTGCTTCGAACATTAAGAGTAGGGTAAATCGCCAATCTGTTTTGGGCGCCATCACGTCTGCTCAGCAGAGACTCAAGTTGTATAACAAGGTTCCTCCAAATGGGCTTGTGCTATATACTGGAACAATCGTGACTGAAGATGGAAAAGAAAAGAAAGTTACAATTGATTTTGAGCCTTTCAGACCTATAAATGCTTCTCTCTATCTCTGCGACAACAAGTTCCATACGGAAGCCCTGAATGAACTTCTAGAATCTGATGACAAGTTTGGCTTCATTGTCATGGATGGTAATGGAACACTTTTTGGGACATTGAGTGGTAACACACGTGAAGTCCTTCACAAATTTAGCGTCGACCTTCCTAAGAAACATGGAAGAGGAGGTCAGTCAGCACTTAGGTTTGCCCGTCTTCGGATGGAGAAACGACACAACTATGTCAGGAAAACAGCAGAGCTTGCAACCCAGTTCTATATTAATCCGGCCACTAGTCAACCCAATGTTGCAGGATTGATACTGGCTGGATCAGCTGACTTCAAAACAGAGCTCAGCCAATCCGACATGTTTGATCCTCGTCTTCAGGCTAAAATACTTAATGTGGTTGATGTCTCTTACGGAGGGGAAAATGGATTTAATCAGGCTATTGAATTGTCGTCCGAGATCTTGTCTAATGTAAAATTTATACAGGAGAAGCGTTTGATTGGAAAATACTTTGAAGAGATTAGCCAGGACACGGGGAAATATGTTTTTGGTGTTGACGACACACTGAAAGCTCTGGAGATGGGTGCTGTTGAGATACTAATTGTTTGGGAAAATTTGGATATCAATAGGTACGTATTAAAGAATGTTTCCACTGGTGAGGTTATTATAAAGCACTTGAATAAGGAACAGGAAGCCAATCAGAGCAACTTCCGTGACCCCGTCACCGCTGCTGAATTGGAGGTTCAAGAAAAAATGGCCTTGCTGGAATGGTTTGCAAACGAGTACAAGAAGTTCGGTTGTACCCTGGAATTTGTTACGAACAAATCACAGGAAGGATCACAATTCTGCAGAGGTTTTGGTGGTATTGGAGGAATTCTTCGTTACCAGCTTGACATAAGATCGTTTGATGAACTATCCGATGGGGAAGAGTATGGTGATTCTGAATAG 1311 41.8 MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNVSTGEVIIKHLNKEQEANQSNFRDPVTAAELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDELSDGEEYGDSE 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9718254 9719564 - Carg11554-RA Car17g01283 165655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01283 436 Pfam eRF1 domain 1 18 138 IPR005140 -
Car17g01283 436 Pfam eRF1 domain 3 281 418 IPR005142 -
Car17g01283 436 Pfam eRF1 domain 2 144 277 IPR005141 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g01283 Car-Chr17:9718254 Car08g00025 Car-Chr8:120463 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01283 K03265 - csv:101203556 836.639