Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g01324 ATGCTGAAAACATTAGAGAGATACCAGAAATGCAACTATGGAGCACCAGAGCCGAATGTGTCCACAAGAGAGGCCTTGGTAATCACTCTTACTTTTCAGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCCCTTGAAAGGCAACTTGATATGTCACTCAAGCACATAAGGTCAACAAGGACTCAGTACATGTTAGATCAACTCACCGATCTTCAACGTAAGGAGCATCTTCTTAACGACGCAAACAGGACTCTGAAACAAAGGTTAGTAGAAGGGTATCAAGTAAATGCTCTCCAATTGAACCAAAGTGGTGATGATATGATGTATGGAAGACACCAAGCTCACCCTCCACCCGATGCCTTCTTCCATCTTTTAGATGCCGAACCCACCTTACAAATTGGGTATCACCCAGATCCGCTAACAGTGGTCACCGCTGGGCCAAGCATGAATAATTTCCTCCCAGGGTGGTTGCCTTGA 495 45.05 MLKTLERYQKCNYGAPEPNVSTREALVITLTFQNLLGEDLGPLSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVNALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGWLP 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9910000 9911379 + Carg11597-RA Car17g01324 165696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g01324 164 Pfam K-box region 32 95 IPR002487 GO:0003700|GO:0005634|GO:0006355
Car17g01324 164 ProSiteProfiles K-box domain profile. 1 107 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g01324 Car-Chr17:9910000 Car14g01026 Car-Chr14:8791655 2.88E-47 dispersed
Car08g00156 Car-Chr8:948617 Car17g01324 Car-Chr17:9910000 4.89E-60 transposed
Car17g01324 Car-Chr17:9910000 Car08g00155 Car-Chr8:946020 4.09E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g01324 - - csv:101216798 287.73