Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00024 ATGGGTGGTGGCAGAAGAAAAAGGAGGCAGCATTTCAGAAGGATTCATGCCTTTACTTGTGGAAGAGCTTCATTCAAAGACGAGCATTCTTTAATTGGAGGGCCTGGTTTCTCCAGGGTAGTTTACTGTAACGATCCAGATAGCTCTGAGGCAAGTCTTCTCAACTATGGAGACAATTATGTCAAAACTTCCAAATATACCGTTGCTTCATTCTTCCCCAAATCCTTGTTTGAGCAATTCAGAAGGGTCGCCAACTTGTATTTCCTCCTTTGTGCTTGCCTTTCCTTTACCCCTCTTTCGCCCTATTCCCCCGTCAGTAATGTTCTTCCTCTTGTTGTTGTTGTTGGAGCCACCATGGCCAAAGAGGCCCATGAAGATTGGAAGAGAACCAAACAGGATATGGAGATGAATAACAGGGAGGTGAAAGTTCATATTCGAGATGGAGAGTTTGTTGAGACTAAATGGATGGAATTGAAGGTTGGAGATGTAGTTAAAGTGGAGAAGGATGAATTCTTCCCTGCTGATCTTATTCTGCTTTCGTCGAGTTATGAGGAAGCGATTTGCTACGTCGAGACGATGAATCTCGACGGGGAAACTAATTTGAAACTGAAGAACGCATTAGAAGCGAGCTCGAACTTGCATGAAGATTCCAGCTTCCAGAATTTCAAGGCTATAATAAAATGTGAAGATCCGAATGCAAACTTGTATGCCTTTGTGGGGAGTATGGAGCTGGAAGAGCAGCAATACCCCCTCAGCCCTCAACAGCTTCTTCTTCGGGACTCGAAGCTGCGAAACACTGATTTTATATACGGCGTCGTGATCTTCACAGGTCGTGATACAAAGGTTATGCAGAACTCAACTGCTCCTCCTTCCAAGAGAAGCAAGATTGAAAAGAGGATGGACAAGGTTGTGTTCTTCTTGTTCGCTGTCTTGGTTTTGATATCAATTGCGGGGTCGATTTTCTTCGGAGTTTCAACTAGAGACGATATCGATAATGGAAGAAGTACGAGATGGTACCTTAGGCCAGACGATACCACAATGTATTACAACCCGAAAAATGCTCCAGCTGCAGCAGTATTGCAATTTTTCACATCTCTTATGCTTTTTAGCTATTTGATTCCCATATCATTGTATGTGTCCATAGAAATTGTCAAAGTTCTGCAGAGTGCCTTCATCAACCAAGATACACACATGTACTACGAGGAAACTGATACGCCCGCACATGCCCGTACCTCAAATTTGAATGAAGAGCTTGGCCAAGTCGACACCATACTCTCGGATAAAACGGGGACATTGACCTGCAATTCGATGGAGTTTATCAAGTGTTCGGTGGGCGGGACTGCTTACGGGCGAGGAATCACAGAAGTAGAGAGAGCTCTTGCAAGAAGAAAGGAGTCAAGTTTACCTGAAAATCTAGGGGCCAACAATGCACGTCTTAGCAGTGAAAAACCACTCATTAAGGGGTTTAACTTCAAGGATGATAGAATAATGGAAGGTAATTGGGTGAAGGAGCCTCGAGCCGATGTAATCCAAAAGTTCCTACAGGTACTGGCCATCTGTCACACTGCATTGCCAGAAATTGATGAGGAAACTGGAAGTATTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAATTCGGTTTTGAATTCTATGAAAGGACTCAGACAAGCATTTTGCTGCGCGAGTTCGACCCGACCTCCGCCAAAAAAGTTGAAAGATCATATCAACTACTGGATGTTTTGGAATTTAATAGCACAAGAAAGAGGATGTCTGTGATTGTAAGAAATGCAAAGGGACAGTTGCTACTACTTTGTAAAGGAGCTGACAGTGTTATGTTTGAAAGACTTGCAAAGAATGGAAGTGAGTTTGAAGAACAAACTAAGGTGCACATCAATGAGTATGCGGATGCTGGTTTAAGAACTTTGGTGCTTGCATACCGCGAGCTGAAGGAGGAGGAATTCAATACATTTCATCAAGAATTCATCAAAGCCAAAAACACGGTGAGCGAAGATCGTGATGGCATAATCGATCAGTTAATCGAAAGCGTTGAGAAAGATTTGATTCTTCTTGGTGCTACAGCAGTTGAAGATAAACTTCAAAATGGGGTCCCTGAATGCATTGACAAACTTGCTCAAGCTGGAATCAAAATATGGGTTCTGACTGGAGATAAAATGGAAACTGCCATCAATATTGGCTTTGCTTGTAGCTTACTTAGACAAGGAATGAGGCAAATAATTATCAGTTCAGAGACTCCGGAAGGGAAAGCTTTAGACAAAGTGGAAGATTCTCAAAAATCTGCAGCTATGAAGGCGTTCAAGGAAAGTGTGATGCAGCAACTAACTGATGCAAAGGCATTACTTTCGAGTTCGACCAAAACCCGGGAAGCATTGGCTTTGATAATTGATGGAAAGTCCCTCACCTACGCTTTGGAGGATGATGTGAAGAACCTATTTCTGGAGCTTGCCATTGGTTGTGCTTCAGTTATATGCTGCAGATCATCTCCTAAACAGAAAGCTCAAGTTACCCAATTGGTCAAGGTTAAAACAGGAGGCACCACTCTAGCAGTTGGTGATGGTGCAAACGATGTCGGAATGCTCCAAGAAGCGGATATCGGGATCGGTATTAGCGGTGTAGAAGGAATGCAGGCAGTCATGTCAAGTGATATTGCAATAGCGCAGTTTCGATATTTAGAGAGGCTTCTCCTTGTGCATGGACATTGGTGTTACAGAAGGATCTCTTCCATGATATGCTATTTCTTCTACAAGAACATCGTTTTTGGGTTCACTCTCTTCTTCTTTGAGTTGTATGCATCATTCTCCGGCCAAGCTGTATACAATGACTGGTTCCTTTCGCTGTACAACGTCTTCTTTACGTCTCTCCCTGTGATCGCATTGGGAGTATTCGATCAAGACGTCTCGTCCCGGTACTGTCTTAAGTTCCCACTTTTATACCAAGAAGGTGTCCAAAATGTGTTGTTTAGTTGGGTTCGAGTTATCGGGTGGGTGTTCAATGGACTACTGAGTTCTGTGATCATCTTCTTCTTCTGTGTTGTGGCAATGGAACATCAAGCTTTCCGCAACAGTGGAGAGGTGGTTGGGTTGGAAATTCTGGGTGCCACCATGTGCACTTGTGTTGTTTGGGTTGTGAACTGTCAAATGGCATTGTCAATCAGTTACTTCACATACATTCAACATCTCTTCATCTGGGGCAGCATCATTCTCTGGTACTTATTCCTTATGGCATATGGAGCTATGAACCCAACCATATCAACCACGGCATTTCAGGTCTTCATCGAGGCATGCGCCCCGGCACCGTCGTTTTGGATCCTCACACTATTAGCTCTCGGGGCATCCCTTCTCCCATACTTCATCTACGCATCCATCCAAATGCGGTTCTTCCCAATGTACCATCAAATGATTCAATGGATGAAAGAAGACGGGCAATCAAACGATCCAGAATACTGTCAAGTAGTGAGACAGAGATCGCTACGACACACGACCGTTGGTTACACAGCTAGTAATCCAGAGCTAGCGACGATGGCGATGAAGATGGCCGCCATCAGAGCTTCCGCCATTCCCAGACATCACCCTCCTCCTTCTTCCCCATCACTTCATTCTTCCTCTCACAGATCCGATTCCAAATCCCAATTCCGTCCCATTTCCGTCGCCTTACCGGCCTCCACTACCCTCTCTCTGTTAGCCCTTTTTTCTCCTCAGTACGAAGCTAGGGCTCTCAGCAAAGACCAAATCATCTCGTCTCTCGACAATGTGGAGAAGACGTTTGATCAGGTTCAAGAAATGGGTTCGAATTTCTTTGATATTGCACAACAGGTCGTTGACTCTGCTACAAATATTTTGAAGCCAGGCGTCGATGCGGCACTGCCGATCGTGAAGCAGGCTGGAGAAGAGGCGTTGAAGGTTGCTTCTCCAACAATTTCCGAAGCTTCGAAGAAAGCCCTAGAAGCACTTGAGGGCTCTGGCATTGACACCGAACCTGTTCTAAGTGCTGCTAAGACAGTTGTAGGTGCCGCTCAACAAACCGGTAAGGTCATTGAAGGTGCCACGCCTTTAGCCTCATCGACTGTCGAGAAGTTCTCTGCAGCCGACCCTCTCCTAATTGCAGAAGTTGCCGGAGTCTTAGCCTTGGCATACCTGCTTTTTCCTCCAATATGGTCTGCCATCTCTTTCAACTTTCGTGGTTACAAAGGTGAACTCTCTCCTGCTCAAACACTTGATCTAATTTCGTCCAGTAATTACTTTCTAATCGATATACGATCCGAGAAGGAGAAGGACAAGTCTGGCATTCCTCGCCTTCCTTCTAGTGTTAAGAACCAGTCAATTGCCATTCCTTTGGAAGAATTACCAAGCAAGTTGCGGGGCGTTGTCCGAAATGTAAAGAAACTAGAAGCTGAACTTTCAGCCATCAAAATTTCGTATCTCAAGAAACTCAACAAAGGCTCCAATATAGTTATCCTGGGATCATACTCAGACTCGGCAAAAGCGGTTGCAAAAGCACTCACTGCCCTTGGCTTCAAGAACTCCTGGATTGTAACCGATGGGTTTTTAGGTAGCAAAGGTTGGTTAAAGAGCCAGTTAGGAACAGATACATATAAGTTTTCATTGGCAGAGATCCTTTCGCCATCCCGGGTCATCCCAGCCGGTACCAAACGTTTCGGGGGGACGACCTCACTGACATCGGCATCTCGTAAAAAGTTGCTTCCTGGTGCCGATTAA 4755 44.79 MGGGRRKRRQHFRRIHAFTCGRASFKDEHSLIGGPGFSRVVYCNDPDSSEASLLNYGDNYVKTSKYTVASFFPKSLFEQFRRVANLYFLLCACLSFTPLSPYSPVSNVLPLVVVVGATMAKEAHEDWKRTKQDMEMNNREVKVHIRDGEFVETKWMELKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETMNLDGETNLKLKNALEASSNLHEDSSFQNFKAIIKCEDPNANLYAFVGSMELEEQQYPLSPQQLLLRDSKLRNTDFIYGVVIFTGRDTKVMQNSTAPPSKRSKIEKRMDKVVFFLFAVLVLISIAGSIFFGVSTRDDIDNGRSTRWYLRPDDTTMYYNPKNAPAAAVLQFFTSLMLFSYLIPISLYVSIEIVKVLQSAFINQDTHMYYEETDTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVERALARRKESSLPENLGANNARLSSEKPLIKGFNFKDDRIMEGNWVKEPRADVIQKFLQVLAICHTALPEIDEETGSISYEAESPDEAAFVIAAREFGFEFYERTQTSILLREFDPTSAKKVERSYQLLDVLEFNSTRKRMSVIVRNAKGQLLLLCKGADSVMFERLAKNGSEFEEQTKVHINEYADAGLRTLVLAYRELKEEEFNTFHQEFIKAKNTVSEDRDGIIDQLIESVEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMRQIIISSETPEGKALDKVEDSQKSAAMKAFKESVMQQLTDAKALLSSSTKTREALALIIDGKSLTYALEDDVKNLFLELAIGCASVICCRSSPKQKAQVTQLVKVKTGGTTLAVGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTLFFFELYASFSGQAVYNDWFLSLYNVFFTSLPVIALGVFDQDVSSRYCLKFPLLYQEGVQNVLFSWVRVIGWVFNGLLSSVIIFFFCVVAMEHQAFRNSGEVVGLEILGATMCTCVVWVVNCQMALSISYFTYIQHLFIWGSIILWYLFLMAYGAMNPTISTTAFQVFIEACAPAPSFWILTLLALGASLLPYFIYASIQMRFFPMYHQMIQWMKEDGQSNDPEYCQVVRQRSLRHTTVGYTASNPELATMAMKMAAIRASAIPRHHPPPSSPSLHSSSHRSDSKSQFRPISVALPASTTLSLLALFSPQYEARALSKDQIISSLDNVEKTFDQVQEMGSNFFDIAQQVVDSATNILKPGVDAALPIVKQAGEEALKVASPTISEASKKALEALEGSGIDTEPVLSAAKTVVGAAQQTGKVIEGATPLASSTVEKFSAADPLLIAEVAGVLALAYLLFPPIWSAISFNFRGYKGELSPAQTLDLISSSNYFLIDIRSEKEKDKSGIPRLPSSVKNQSIAIPLEELPSKLRGVVRNVKKLEAELSAIKISYLKKLNKGSNIVILGSYSDSAKAVAKALTALGFKNSWIVTDGFLGSKGWLKSQLGTDTYKFSLAEILSPSRVIPAGTKRFGGTTSLTSASRKKLLPGAD 1584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 114729 121935 + Carg22762-RA Car18g00024 165726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00024 1584 Pfam E1-E2 ATPase 136 328 - -
Car18g00024 1584 MobiDBLite consensus disorder prediction 1208 1223 - -
Car18g00024 1584 Pfam Phospholipid-translocating ATPase N-terminal 41 107 IPR032631 -
Car18g00024 1584 MobiDBLite consensus disorder prediction 1199 1223 - -
Car18g00024 1584 Pfam Cation transport ATPase (P-type) 536 623 - -
Car18g00024 1584 ProSiteProfiles Rhodanese domain profile. 1422 1543 IPR001763 -
Car18g00024 1584 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1141 IPR032630 -
Car18g00024 1584 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00882 Car18g00024 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01603 Car-Chr4:9266211 Car18g00024 Car-Chr18:114729 0 dispersed
Car08g00661 Car-Chr8:4250696 Car18g00024 Car-Chr18:114729 0 dispersed
Car15g00499 Car-Chr15:2721592 Car18g00024 Car-Chr18:114729 0 dispersed
Car15g01283 Car-Chr15:10038789 Car18g00024 Car-Chr18:114729 0 dispersed
Car17g00671 Car-Chr17:6210955 Car18g00024 Car-Chr18:114729 0 dispersed
Car12g00079 Car-Chr12:349840 Car18g00024 Car-Chr18:114729 9.91E-09 transposed
Car13g00883 Car-Chr13:9287273 Car18g00024 Car-Chr18:114729 0 transposed
Car13g00882 Car-Chr13:9281521 Car18g00024 Car-Chr18:114729 0 wgd
Car18g00024 Car-Chr18:114729 Car18g00984 Car-Chr18:10348396 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00024 K01530 K14802 csv:101209427 2112.42