Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00058 ATGAAACTTTTTGGTGACCCACCGATTAAATATCCACATGGAATTGAAACGCAACTTGTAAATCGTTCGCCTTTTCGACTTGGTAAAGATAATATGAAGAACCTTCTCAAGAAGTTCCATATCATGTCCAGTGGTCAGTCAGAGGATGCAGCAGAAGGGTCTACTTCATCAAGGCGCAGTAAATTAATTGAGGTTTCATCCTCTGATAAGCTGCTATCTCGCTCTCGACCGACCTATTTTAATTCTGAGCATGAACCCTTCTCGGGGATATCCGGTTGGTTGAACTCTGTTACAAATAGGCGTTGCACCAGCCCGACATCATCTTCGGATCCTACTGCAGGGGAGATAATGGAGCCATCTGTTTCAATGTCTAGCAGAGAGGCTGCAGTGGATACATCAAGGCGTGATTCGAGGTTGAGTAATTCGAGGGATCATGATATAGAGGAAGAGAATCAGATACAGCTTGCTTTGGAAATGAGTGCCAGAGAGGATCCTGAGGCGGCTCAGATTGAGGCTGTGAAGCAGATCAGTTTGGGGTCGTGTGATCCTGCTAACACTCCAGCTGAAGTTATTGCCTTTAGATATTGGAATTACAATTCTCTTAGCTATGATGACAAGATCTTGGATGGCTTTTACGACCTATATGGAGTCTTTTCTGAGTCCACCTCAGAAAGAATGCCTTCCCTAGTTGATCTGCAAGGAGCACCAATGTCTGACAGTGTCACTTGGGAAGCAGTTCTGATCAACAAAGCTGCTGATGCAAACTTACTAAAACTAGGACAGACAGCATTGGAGATGGCCATCAAGACAAGGTCGGAATCTCCAATTTCTGTAAATCGTTATTTGGTGCGGAAGCTTGCTGTTTTAGTTTCAGATTATATGGGTGGACCAGTGGGGGATCCTGAAAAGATGTTGAGGAAATGGAGAAATCTTAGTTACAGCTTGAAAGCAACCCTTGGTAGTATGGTTTTTCCTCTTGGCTCCCTTACCGTTGGGATGGCTCGTCATCGTGCATTGCTATTCAAGCTTTTGGCAGACGGTGTGGACATCCCTTGTAGGTTGGTGAAAGGACCACAGTACACAGGTTCTGATGATGTAGCAATGAACTTCGTAAAGATTGATGATGGAAGGGAGTACATTGTGGATTTAATGGCAGATCCTGGTACACTTATTCCAGCTGATGTTGCTCGATCGCTTATAGAGTATGATGAATCCACCTTTTCAGTCGGTCTGCTTTCTAGAGATGTTGGTTCCTCTCAGACAGGCTTTTCAAGCTGTGGGGTTGGCAGTTCATTAGAGGAAAATCTAGATTTTGGTACCACAAAGGAATATGATCCTCCCAATGTTGACAAGGGGCTACCACACGATTTTGCTAGCAAACCAAATTATCCTGGCATGCACGTAAGATCGCCTTCTTGGACTGAGGGTGTTAGCTCGCCTGCAGTGCGCAGAATGAAAGTAAAGGATGTTTCACAATACATGATTGATGCTGCCAAAGAGAATCCGCGATTGGCTCAGAAGCTTCATGATGTGTTGCTTGAAAGTGGTGTAGTTGCACCCCCGAACTTGTTTACCGGGGTATATCCCGACCAAATAGATGTTATTGTCGGGTCTAAGCCGCCAACTGAAGACAAGGATCAAGGTGGAAAGGTGTCTCGTCTCTGCAACAGTGCAGATAAGAAAGCTTCTCATTCAGCTAATTTTTTGCCTCCCTTGCCTCAGCCCAGACTACTTTCTAAAGCAAGCCCTACCCATGGCCAACAACAGCATCTTAAACCTCTGGAGCGCAACCTCTCTCATGATTCAAGAGAAGCACCTGGACAGCCTATAGCCTTACCATTTGAGGTAATTCCAGTGAAGTACGGGAGAAATAGGCCTGTGGCTGCAGCAGCAGCAGCTACTGCAGCTGTTGTTGCATCATCAATGGTCGTAGCTGCAGCCAAGAGTACCGATGCAAATCTTGAAATTCCTGTATCTGCTGCTGCCACTGCCACTGCTGCTGCAGTGGTTGCAACAACTGCAGCAGTCAACAAGCAGTATGAGCAGGTTGAGGCTGATGCCGCTCTTTATTTGCAGCACGGAAGTGGAGATCGGGAGCAGGACGCTTATGGAGAAAATTCAGAGTGTGAACGAATATCTGATAGATCAGCAGGGAATGAAAGCACAAAATCTGATATTACCATTGACGACGTAGCAGAATGCGAGATCCCATGGGAAGATATCTCCTTGGGAGAGCGTATTGGACTTGGGTCTTATGGGGAGGTCTATCATGGAGATTGGCATGGAACTGAGGTAGCTGTGAAGAGGTTTCTAGACCAGGATATTTCTGGTGAATCTCTTGAAGATCTCAAAACCGTGACACGTGCTCCCAATCTTTCTATCGTTACAGAATTTCTTCCCAGAGGTAGCTTGTACAGGTTAATACACCGTCCCAACAATCAATTAGACGAGCAAAAGCGATTAAGAATGGCCCTTGATGCAGCTCGAGGAATGAATTATTTGCACAATTGCACCCCCGTTGTTGTACACCGTGATTTGAAGTCTCCAAATCTTCTTGTTGATCGGAATCGGGTTGTGAAGGTATGCGATTTTGGTTTATCAAAAATGAAGCACAGCACGTTTCTTTCTTCAAGGTGTGACGTTTATAGTTACGGAGTCATACTATGGGAACTTTCTACAATGAAACAGCCATGGGGAGGAATGAACCCGATGCAAGTTGTTGGCGCCGTTGGCTTTCAGCATCGCCGTCTTGACATCCCAGACAATATAGATCCTGCCATTGCTGACATTATTAGGAAATGCTGGCAAACAGATCCAAGATTAAGGCCTTCATTTGCCGAGATCTTGGCTGCACTAAAGCCACTGCAGAAGCCAATGTTGAGTTCTCAAGTACCGAGACGGAATGCTTCTGCAGGTAGTGGTCGATCGAAGGCTCGATTATTGCAAGTTGCTGAAGACCCATTAGGATAA 2970 45.56 MKLFGDPPIKYPHGIETQLVNRSPFRLGKDNMKNLLKKFHIMSSGQSEDAAEGSTSSRRSKLIEVSSSDKLLSRSRPTYFNSEHEPFSGISGWLNSVTNRRCTSPTSSSDPTAGEIMEPSVSMSSREAAVDTSRRDSRLSNSRDHDIEEENQIQLALEMSAREDPEAAQIEAVKQISLGSCDPANTPAEVIAFRYWNYNSLSYDDKILDGFYDLYGVFSESTSERMPSLVDLQGAPMSDSVTWEAVLINKAADANLLKLGQTALEMAIKTRSESPISVNRYLVRKLAVLVSDYMGGPVGDPEKMLRKWRNLSYSLKATLGSMVFPLGSLTVGMARHRALLFKLLADGVDIPCRLVKGPQYTGSDDVAMNFVKIDDGREYIVDLMADPGTLIPADVARSLIEYDESTFSVGLLSRDVGSSQTGFSSCGVGSSLEENLDFGTTKEYDPPNVDKGLPHDFASKPNYPGMHVRSPSWTEGVSSPAVRRMKVKDVSQYMIDAAKENPRLAQKLHDVLLESGVVAPPNLFTGVYPDQIDVIVGSKPPTEDKDQGGKVSRLCNSADKKASHSANFLPPLPQPRLLSKASPTHGQQQHLKPLERNLSHDSREAPGQPIALPFEVIPVKYGRNRPVAAAAAATAAVVASSMVVAAAKSTDANLEIPVSAAATATAAAVVATTAAVNKQYEQVEADAALYLQHGSGDREQDAYGENSECERISDRSAGNESTKSDITIDDVAECEIPWEDISLGERIGLGSYGEVYHGDWHGTEVAVKRFLDQDISGESLEDLKTVTRAPNLSIVTEFLPRGSLYRLIHRPNNQLDEQKRLRMALDAARGMNYLHNCTPVVVHRDLKSPNLLVDRNRVVKVCDFGLSKMKHSTFLSSRCDVYSYGVILWELSTMKQPWGGMNPMQVVGAVGFQHRRLDIPDNIDPAIADIIRKCWQTDPRLRPSFAEILAALKPLQKPMLSSQVPRRNASAGSGRSKARLLQVAEDPLG 989
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 291307 300332 + Carg06623-RA Car18g00058 165760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00058 989 MobiDBLite consensus disorder prediction 101 119 - -
Car18g00058 989 MobiDBLite consensus disorder prediction 129 148 - -
Car18g00058 989 Pfam Protein tyrosine and serine/threonine kinase 785 870 IPR001245 GO:0004672|GO:0006468
Car18g00058 989 Pfam Protein tyrosine and serine/threonine kinase 875 951 IPR001245 GO:0004672|GO:0006468
Car18g00058 989 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 148 167 IPR003903 -
Car18g00058 989 MobiDBLite consensus disorder prediction 47 68 - -
Car18g00058 989 ProSitePatterns Protein kinases ATP-binding region signature. 747 768 IPR017441 GO:0005524
Car18g00058 989 Pfam Ethylene-responsive protein kinase Le-CTR1 188 391 - -
Car18g00058 989 MobiDBLite consensus disorder prediction 698 718 - -
Car18g00058 989 ProSiteProfiles Protein kinase domain profile. 741 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00058 989 MobiDBLite consensus disorder prediction 44 68 - -
Car18g00058 989 MobiDBLite consensus disorder prediction 101 148 - -
Car18g00058 989 MobiDBLite consensus disorder prediction 562 591 - -
Car18g00058 989 MobiDBLite consensus disorder prediction 697 723 - -
Car18g00058 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00831 Car18g00058 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00058 Car-Chr18:291307 Car01g01352 Car-Chr1:11967808 0 dispersed
Car13g00831 Car-Chr13:8993799 Car18g00058 Car-Chr18:291307 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89498 PF14381 EDR1 1.80E-73 CL0125 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00058 - - csv:101209024 1558.5