Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car18g00066 | AGAGAGGTGGGAGATTCACCAAAAAGTCCAGAGAGCGGCGGAGGGGGAGGCCGTTCTTCGTCGTCTTTAATGGAGAGCTTATTAGGTCTTCTTCGTATTCGGATCATTCGCGGCGTCAACCTTGCCGTTCGCGACGTTCGCAGCAGTGATCCTTACATCGTTGTTAAATTGAATAAACAGAAATTGAAGACCCGTGTGATCAAGAAGGATGTCAATCCTGAATGGAACGAGGACCTCACTCTTTCTGTTACCGACCCCGATGTTTCAGTCAAGCTCACGGTGTACGACCACGACACGTTTACGATGGACGACAAGATGGGAGATGCGGAGTTCGAGATAGGGCCATACATCGAAGCACTGAAGATGGATTTGGCAGAGCTACCAAGTGGAACCGTGCTGTCAAGAGTGCAGCCATGCAGGCAAAACTGCTTAGCCGAGGAGAGCGCCATAGTGTGGGAGGAAGGCAAGGTTATTCAAAACATTTGCCTGCGCTTGCGCAATGTTGAATGTGGCGAAGTTGAAATCCAGTTGCAGTGGATTGAGCTTCCTGGTGCCAAAGGTTTGTAA | 567 | 49.91 | REVGDSPKSPESGGGGGRSSSSLMESLLGLLRIRIIRGVNLAVRDVRSSDPYIVVKLNKQKLKTRVIKKDVNPEWNEDLTLSVTDPDVSVKLTVYDHDTFTMDDKMGDAEFEIGPYIEALKMDLAELPSGTVLSRVQPCRQNCLAEESAIVWEEGKVIQNICLRLRNVECGEVEIQLQWIELPGAKGL | 188 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 340416 | 341611 | + | Carg06631-RA | Car18g00066 | 165768 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car18g00066 | 188 | ProSiteProfiles | C2 domain profile. | 12 | 129 | IPR000008 | - | |
| Car18g00066 | 188 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Car18g00066 | 188 | Pfam | C2 domain | 29 | 115 | IPR000008 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car13g00824 | Car18g00066 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car14g00769 | Car-Chr14:4397737 | Car18g00066 | Car-Chr18:340416 | 5.94E-77 | dispersed | |
| Car18g00066 | Car-Chr18:340416 | Car07g00052 | Car-Chr7:343146 | 1.15E-41 | dispersed | |
| Car10g00310 | Car-Chr10:1521794 | Car18g00066 | Car-Chr18:340416 | 1.79E-87 | wgd | |
| Car11g00289 | Car-Chr11:1584944 | Car18g00066 | Car-Chr18:340416 | 1.51E-83 | wgd | |
| Car13g00824 | Car-Chr13:8951867 | Car18g00066 | Car-Chr18:340416 | 5.18E-95 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car18g00066 | - | - | cmo:103502345 | 304.293 |