Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00071 ATGCGAACCCAGATGGGAAATCGTTTGATTTCTCTGTTGCTCTTCAGTTTCCTTCTTCTACTCCCCACTGCGAAGCCAGATCTTGCTTCTGATAGAACAGCTCTGCTAGCTCTCCGTTCCGCTGTCGGCGGCCGGATTCTTCTGCTCTGGAATGTGACCGATCAGAACACCTGTTCTTGGCCCGGGATTCATTGCGAGGAGAATCGTGTTACTGTTCTTCGTCTTCCCGGCGTGGCGCTTTCTGGTCAGTTACCGGACGGAGTTTTTGGGAACTTGACTCACCTTCGCACTCTCAGTCTTCGGCTCAACGCCCTGTCCGGTCATCTCCCATCAGATCTCTCTGCTTGCGTTAATCTCCGCAACCTCTATCTACAAGGTAATGAGTTTTCGGGCCTTGTCCCTGATTTCTTGTTCCAGCTCCCTGATCTTGTTCGCCTTAATTTAGCCTCCAATAACTTCTCCGGCGAGATCTCATTGAGCTTCAACAATTTGACTCGTCTTAAGACATTGTTCCTTGAAAACAATCGCTTATCTGGGTCTATCCCGGACTTGAAGATCCCACTAGATCAGTTCAATGTTTCTAACAATCAATTAAATGGGTCGGTTCCAAAGGGTTTGCAATCGTTTTCTTCAAATTCCTTCTTGGGTAATTCTCTCTGCGGGCATCCTCTTGCGGCTTGCCCTGGGGAGAATGGGGATAATATCGATTCTAAGCACAAGAAAAAGCTCTCAGGAGGAGCCATTGCTGGGATTATCATTGGATCTGTTCTGGGTTTTGTATTGATACTTGTAATCTTAATGCTTTTGTGTCGAAAGAAGAGTGCTAAGGAAACAAGTGCAGTGGATGTTGCCACGGTGAAGCATCCTGAAGTGGAAATTCAGGGCGGTAAGCCACCAGGGGAGGTTGAAAATGGCGGCTACAGTAATGGTTATACTGTGCCAGCCGCCACTGCTGCTGGTGGTGCTGCTGCTGCAACAGTGGCGGCGGGGACTGCAAAGAGGGAAGTGAATGGTAATGGAATTGGCTCCAAAAAACTGGTGTTTTTTGGTAATGCTGCAAGGGTGTTTGATTTGGAGGATCTTTTGAGAGCTTCAGCGGAAGTGTTGGGAAAAGGAAGCTTTGGGACAGCTTACAAAGCTGTTCTTGAAGTGGGTTCTGTGGTGGCTGTGAAGAGATTGAAGGATGTTACCATAACAGAGAGGGAATTCAGGGACAAGATTGAAGCTGTCGGATCAATGGATCATGAATGTTTGGTCCCTCTGAGAGCTTACTATTTCAGTATGGATGAGAAGCTTCTTGTCTATGATTACATGGCCATGGGAAGCTTGTCTGCTCTTCTACACGGGAACAAAGGAGCTGGTAGGACACCATTGAACTGGGAAATCAGGTCAGGAATCGCTCTTGGCGCTGCTCGTGGCATCGAATATCTTCATTCTCAAGGTCCTAATGTTTCCCATGGAAACATAAAGTCATCGAATATTCTTCTAACGAAATCGTACGAAGCTCGAGTCTCTGATTTCGGTTTAGCCCATCTTGTTGGACAACCTTCCACCCCCAACCGAGTTGCTGGATATCGTGCACCGGAGGTGACTGATCCTCGTAAAGTTTCGCAGAAGGCTGATGTCTATAGCTTTGGTGTATTGCTATTAGAGCTTTTGACAGGGAAGGCTCCTACCTACTCCGTTTTAAACGAGGAAGGAGTCGATTTACCAAGATGGGTGCAGTCAGTCGTTAGGGAGGAGTGGACATCCGAAGTTTTCGACCTCGAGCTTCTTAGGTACCAAAACGTCGAGGAGGAGATGGTTCAACTATTGCAACTTGCAGTCGATTGTGCAGCTCAATATCCTGATAAGCGTCCTGCAATGTCGGAAGTCACAAAGCGTATACAAGAGCTTCGTCAATCCAGCATTCACGACGTTGCGAATGTACAACCCGACGCTGGTCATGATTCAGACGACATGGGTTCTAGGTGA 1974 47.57 MRTQMGNRLISLLLFSFLLLLPTAKPDLASDRTALLALRSAVGGRILLLWNVTDQNTCSWPGIHCEENRVTVLRLPGVALSGQLPDGVFGNLTHLRTLSLRLNALSGHLPSDLSACVNLRNLYLQGNEFSGLVPDFLFQLPDLVRLNLASNNFSGEISLSFNNLTRLKTLFLENNRLSGSIPDLKIPLDQFNVSNNQLNGSVPKGLQSFSSNSFLGNSLCGHPLAACPGENGDNIDSKHKKKLSGGAIAGIIIGSVLGFVLILVILMLLCRKKSAKETSAVDVATVKHPEVEIQGGKPPGEVENGGYSNGYTVPAATAAGGAAAATVAAGTAKREVNGNGIGSKKLVFFGNAARVFDLEDLLRASAEVLGKGSFGTAYKAVLEVGSVVAVKRLKDVTITEREFRDKIEAVGSMDHECLVPLRAYYFSMDEKLLVYDYMAMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGQPSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTYSVLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPAMSEVTKRIQELRQSSIHDVANVQPDAGHDSDDMGSR 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 369067 371770 - Carg06636-RA Car18g00071 165773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00071 657 ProSiteProfiles Protein kinase domain profile. 363 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00071 657 Pfam Leucine rich repeat 83 128 IPR001611 GO:0005515
Car18g00071 657 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Car18g00071 657 Pfam Protein kinase domain 366 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00071 657 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00816 Car18g00071 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00679 Car-Chr1:4036438 Car18g00071 Car-Chr18:369067 0 dispersed
Car15g00708 Car-Chr15:3936395 Car18g00071 Car-Chr18:369067 0 dispersed
Car18g00071 Car-Chr18:369067 Car11g00462 Car-Chr11:2548674 0 dispersed
Car14g00761 Car-Chr14:4332047 Car18g00071 Car-Chr18:369067 0 transposed
Car13g00816 Car-Chr13:8917335 Car18g00071 Car-Chr18:369067 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89499 PF00069 Pkinase 2.30E-37 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00071 - - csv:101222458 1107.43