Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00075 ATGGCTCTGGTTCGTGATCGCCTCCAGTTGAAACTCCGCCTCCCGGACCTCTCCGACTGCGGTCCCCGCTTCCCCCTCCCCCTCCCACCCTCCTCTGCCCCTGCCATCTCCTCCGCCGACCTCGAAAAGCTCCAAGTCCTCGGGCACGGCAACGGTGGCACAGTCTACAAAGTCCGCCACAAGCGAACCTCCAACATCTACGCTCTCAAGGTCGTCCACGGCGACGGCGATCCCACCGTTCGCCGCCAGGTTTTCAGAGAGATGGAGATTCTCCGCCGTACGGACTCTCCTTACGTCGTGAAATGCCATGGAATCTTCGAGAAGCCGTCTGGAGATGTCACGATTTTGATGGAGTATATGGATCGAGGATCGCTTGATACGCTCTTGAAGAAGAATACCACGCTGTCAGAGTCCACGCTCGCTCACGTATCGCGTCAGGTTCTTAATGGCCTTCACTACCTTCACTCTCATAAAATCATTCATCGCGATATTAAACCGTCGAATCTCTTGGTGAATAAGAATATGGAGGTTAAGATTGCCGATTTTGGAGTTAGTAAAATCATGTGTAGGACTCTGGATGCTTGCAATTCCTACGTCGGAACCTGCGCTTATATGAGTCCGGAGCGGTTCGATCCAGAGACTTACGGCGGAAATTACAACGGTTACGCCGGAGACATATGGAGTTTAGGCCTTACTCTTCTGGAACTCTATTTAGGCCATTTTCCTTTTCTTCCGCGTGGTCAGAGACCGGATTGGGCGACTCTGATGTTTGCGATTTGCTTTGATGAGCCGCCGACGCTGCCGGAGGATGCGTCAGAGGAGTTTCGAAGCTTCGTCCAGAGTTGTTTGCAGAAGGAATCGAGCAAGAGATGGACGGCGGCGCAATTATTAACGCATCCGTTTGTAAGTAAGGAATCGAGATCCGATCGGTGA 933 52.63 MALVRDRLQLKLRLPDLSDCGPRFPLPLPPSSAPAISSADLEKLQVLGHGNGGTVYKVRHKRTSNIYALKVVHGDGDPTVRRQVFREMEILRRTDSPYVVKCHGIFEKPSGDVTILMEYMDRGSLDTLLKKNTTLSESTLAHVSRQVLNGLHYLHSHKIIHRDIKPSNLLVNKNMEVKIADFGVSKIMCRTLDACNSYVGTCAYMSPERFDPETYGGNYNGYAGDIWSLGLTLLELYLGHFPFLPRGQRPDWATLMFAICFDEPPTLPEDASEEFRSFVQSCLQKESSKRWTAAQLLTHPFVSKESRSDR 310
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 394422 395354 - Carg06640-RA Car18g00075 165777
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car18g00075 310 Pfam Protein kinase domain 42 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00075 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Car18g00075 310 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Car18g00075 310 ProSiteProfiles Protein kinase domain profile. 41 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00020 Car-Chr1:111520 Car18g00075 Car-Chr18:394422 1.69E-96 dispersed
Car14g00608 Car-Chr14:3382833 Car18g00075 Car-Chr18:394422 3.55E-45 dispersed
Car14g01085 Car-Chr14:9531660 Car18g00075 Car-Chr18:394422 1.02E-91 dispersed
Car13g00812 Car-Chr13:8898235 Car18g00075 Car-Chr18:394422 1.79E-60 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89500 PF00069 Pkinase 1.10E-67 CL0016 Car PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00075 K20604 - csv:101203133 549.666