Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00101 ATGGCTTGGACGGAAAGGAGATGGGCCTCAGCGATATCGAAACAAGCTGTTTTTGCCGCCGCCGCCGCCATGCCGCCGAGACGATATGCCGTTGGACGGGCCGATGAGGCCACCAACCCCGACTCCGTTAGAGCCACCTTGGCTGAGTTCCTTTCCACTTTCATCTTCGTCTTTGCCGGAGAAGGCTCCGTCCTCGCTCTCGATAAAATTTTCAAGCCAGCAGACTATGGAAGCTACGGTCGTGGTGGTTATGGTTACAGCCATGGTCATGGTTACGGTCGAAGGGGAGGCGACACGGGCCGTGGGGCATCGGATTTAGTAGTAATAGCAATAGCGCATGCATTTGCGCTGTTCTCGGCCGTAGCGGCGAGTATCAACGTCTCCGGTGGGCATGTGAATCCTGCTGTTACATTTGGTGTACTTCTAGGAGGAAGGATATCTCTTATCCGTGCATTCTTCTATTGGGTAGCTCAGATTTTGGGCGCCATTGTGGCTTCCCTGATCTTGAGACTCGCAACGGGTGGCATGAGGCCAATGGGGTTCTTCGTTTCATCGGGCATATCAGAACTGCACGGGTTTCTACTAGAGATATTGCTTACATTTGCTTTGGTGTACGTAGTCTACGCAACAGCAGTAGACCCGAAGAGGGGAAGTTTGGAAACAATAGCACCACTGGCAATCGGGTTAATAGTCGGGGCGAATATTCTAGTGGGTGGGGTATTTGATGGGGCCTGTATGAACCCGGCCCGGGCCTTTGGGCCGTCGTTAGTGGGCTGGAGATGGGACAACCATTGGATCTACTGGATTGGGCCATTGCTGGGAGGTGGGCTTGCTGCACTTGTCTATGAGTATTTGGTGATTCCAGTTGAACCTCCTGTACATGCCCCCCACCAGCCTTTAGCTCCGGAAGATTACTGA 918 53.27 MAWTERRWASAISKQAVFAAAAAMPPRRYAVGRADEATNPDSVRATLAEFLSTFIFVFAGEGSVLALDKIFKPADYGSYGRGGYGYSHGHGYGRRGGDTGRGASDLVVIAIAHAFALFSAVAASINVSGGHVNPAVTFGVLLGGRISLIRAFFYWVAQILGAIVASLILRLATGGMRPMGFFVSSGISELHGFLLEILLTFALVYVVYATAVDPKRGSLETIAPLAIGLIVGANILVGGVFDGACMNPARAFGPSLVGWRWDNHWIYWIGPLLGGGLAALVYEYLVIPVEPPVHAPHQPLAPEDY 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 544821 546369 + Carg06666-RA Car18g00101 165803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00101 305 ProSitePatterns MIP family signature. 131 139 IPR022357 -
Car18g00101 305 Pfam Major intrinsic protein 38 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00213 Car-Chr14:1009026 Car18g00101 Car-Chr18:544821 3.24E-83 dispersed
Car15g01239 Car-Chr15:9620866 Car18g00101 Car-Chr18:544821 1.80E-54 dispersed
Car18g00101 Car-Chr18:544821 Car03g01114 Car-Chr3:9045777 5.69E-32 dispersed
Car13g00787 Car-Chr13:8691917 Car18g00101 Car-Chr18:544821 1.36E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00101 K09873 - csv:101208863 454.521