Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00122 ATGGGGGACAAGCCGGAAGTGTTGGAGGCTGTGTTGAAGGAAGCTGTGGATTTGGAAAACATTCCCATTGATGAGGTTTTTGAAAACCTGAGATGTAGCAAAGAGGGTCTTACAAGTGAGGCTGCTGAGGAACGTTTGAAGATTTTTGGGCACAACAAGCTTGAGGAAAAGAAGGAGAGCAAAGTGTTGAAGTTCTTGGGGTTCATGTGGAATCCTCTATCATGGGTTATGGAAGCTGCTGCTATTATGGCTATTGCACTTGCAAATGGAGGAGGAAAGCCCCCTGACTGGCAGGATTTTGTTGGTATCATTACCTTGCTTATCATCAACTCGACGATCAGTTTTATCGAGGAAAACAATGCTGGAAACGCTGCAGCTGCGCTCATGGCTCGTCTTGCTCCTAAAGCTAAGGTTCTTCGAGATGGACGGTGGAGCGAGCAAGATGCTTCGATTTTAGTTCCTGGTGATGTAATCAGTGTTAAACTTGGAGACATTATTCCTGCTGATGCTCGTCTTCTTGATGGGGATCCATTAAAAATCGACCAGTCTGCTCTTACAGGTGAATCTCTCCCTGTAACGAAAGGTCCTGGTGATGGTGTTTACTCTGGTTCTACTTGTAAGCAAGGAGAGATTGAAGCTGTGGTTATTGCTACTGGTGTGCACACCTTTTTTGGTAAAGCTGCTCATCTTGTTGACACCACCAACCAAGTGGGACACTTCCAAAAGGTCTTGACTTCCATAGGGAACTTCTGCATATGTTCCATTGCTTTGGGAATGGTAATCGAGATCATCGTCATGTACCCAATTCAGGACCGTGAGTATCGTCCCGGGATCGACAACCTCCTCGTGCTACTCATTGGGGGCATTCCCATAGCCATGCCTACAGTTCTCTCAGTAACAATGGCTATAGGTTCTCATAGGTTATCCCAACAGGGCGCCATCACCAAGAGGATGACCGCCATCGAAGAAATGGCAGGCATGGATGTCCTTTGCAGTGACAAGACAGGAACACTGACATTGAACAAGCTAACAGTTGACAAAAACCTCGTCGAGGTTTTCACTAAAGGGATAGATGCAGACACTGTGGTTCTAATGGCTGCTAGAGCATCAAGAACTGAGAATCAAGATGCTATAGATACTGCTATTGTTGGGATGCTAGCTGATCCAAAGGAGGCACGAGCTGGCATTCAGGAAGTTCATTTCCTTCCTTTCAATCCTACTGATAAGCGAACAGCATTGACTTATATTGATCATGAGGGTAAGATGCATAGAGTCAGTAAAGGTGCTCCAGAACAGATTCTGAATCTTGCATACAATAAGTCGGAGATCGAGAGGAAAGTTCATGCAGTGATCGATAAATTTGCTGAACGAGGACTGCGTTCACTTGCTGTAGCATATCAGGAAGTTCCTGAAGGAAGGAAAGAGAGTGCTGGAGGTCCTTGGCAATTCATGGGCCTCTTGCCTTTGTTTGACCCACCAAGGCATGATAGTGCAGAGACAATAAGGAGAGCTTTGAATCTCGGCGTAAATGTGAAAATGATTACAGGAGATCAACTAGCTATAGGCAAGGAAACGGGGCGTCGGTTGGGGATGGGAACGAACATGTATCCATCGTCAGCTCTACTAGGACAAGAAAAAGACGAGTCCATTGCTGCTTTACCTGTCGACGATCTTATCGAAAAAGCAGATGGTTTTGCTGGTGTATTCCCTGAGCACAAATACGAGATCGTAAAACGCTTGCAAGCTATGAAACATATATGTGGGATGACTGGCGACGGAGTGAACGATGCTCCTGCACTTAAAAAAGCAGACATCGGTATAGCTGTAGCTGATGCAACCGATGCTGCTCGAAGTGCTTCTGATATTGTTCTTACTGAACCTGGTCTCAGTGTTATCATCAGCGCTGTTTTAACCAGTCGAGCTATATTTCAAAGGATGAAGAATTACACGATTTATGCAGTTTCCATCACAATACGTATCGTGCTTGGTTTCATGTTGCTGGCACTCATTTGGAAATTCGATTTCCCTCCGTTTATGGTGCTTATCATAGCTATCCTTAACGATGGCACAATCATGACAATATCAAAGGACAGAGTTAAGCCATCTCCTCTACCAGATAGTTGGAAGCTGGCTGAGATTTTCACTACTGGCATTGTTCTTGGCAGCTACTTGGCGATGATGACAGTCATATTTTTCTGGGTGTCGTATAAAACCAACTTTTTCCCGCGAGTCTTTGGTGTACCAACCCTCGAAAAAACAGCTCATGATGACTTCAGGAAGCTAGCCTCAGCTATATATCTGCAAGTGAGCACTATCAGTCAGGCACTCATTTTCGTTACACGATCACGGAGTTGGTCCTACGTCGAGCGTCCTGGGCTGTTTCTTGTCGTGGCGTTCATAATTGCTCAGATGGTTGCTACTCTTATTGCTGTCTATGCTAATTGGAGCTTTGCTGCCATTGAAGGCATTGGTTGGGGTTGGGCTGGTGTCATTTGGCTCTATAACATTATCTTTTATGTTCCTCTTGACCCTATAAAGTTTGCTATTAGATATGCTTTGAGTGGAAAGGCTTGGGACCTCATGCTTGAGCAAAGGGTCGCTTTCACGAGACAAAAGGATTTCGGTAAGGAACAACGTGAGTTGCAATGGGCTCACGCTCAAAGAACGTTGCACGGTTTGCAACCGCCTGATACGAAGATGTTCACTGAGCGAACTCACTTCACTGAACTCAATCATATGGCTGAAGAAGCTAAAAGAAGAGCGGAAATTGCTAGATTGAGGGAACTCCATACACTAAAAGGTCACGTCGAATCAGTCGTTCGATTGAAGGGTCTCGATATCGAAACGATTCAACAATCATACACCGTGTGA 2871 45.14 MGDKPEVLEAVLKEAVDLENIPIDEVFENLRCSKEGLTSEAAEERLKIFGHNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWSEQDASILVPGDVISVKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTSIGNFCICSIALGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFTKGIDADTVVLMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAYNKSEIERKVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFMGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQEKDESIAALPVDDLIEKADGFAGVFPEHKYEIVKRLQAMKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWVSYKTNFFPRVFGVPTLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSYVERPGLFLVVAFIIAQMVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYVPLDPIKFAIRYALSGKAWDLMLEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHFTELNHMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQSYTV 956
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 649708 657747 - Carg06687-RA Car18g00122 165824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00122 956 Pfam haloacid dehalogenase-like hydrolase 327 604 - -
Car18g00122 956 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Car18g00122 956 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Car18g00122 956 Pfam E1-E2 ATPase 132 310 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00164 Car18g00122 CCT
Car11g00134 Car18g00122 CCT
Car10g00164 Car18g00122 ECH
Car11g00134 Car18g00122 ECH
Car13g00763 Car18g00122 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00850 Car-Chr12:8294040 Car18g00122 Car-Chr18:649708 0 dispersed
Car10g00164 Car-Chr10:789874 Car18g00122 Car-Chr18:649708 0 wgd
Car11g00134 Car-Chr11:756845 Car18g00122 Car-Chr18:649708 0 wgd
Car13g00763 Car-Chr13:8589252 Car18g00122 Car-Chr18:649708 0 wgd
Car18g00122 Car-Chr18:649708 Car04g02647 Car-Chr4:20632240 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00122 K01535 - csv:101214920 1795.79