Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00155 ATGGCGATTCGAGGGATCGATTTCAAATGGTACGATGGATTCTTCTTGTCAATGCTTGCTACTAGCATAATAATTGTGACTATCAATTGGAGGCGGTACAATACATGTAGATATCCGTTGCACGTATGGATCGTGGTTGATTATACCTCTGTGTTTGCTTTTCGCCTTTTGCTGTTCATAGATAATGCACTTTCAGCTGGAATGGGATTGGATTTTGGATGGCACCAACAATATGCTCAGTTTTGTGGAAGAGTTGTGGTTCTTTCTATTCTCTCTATATTCCTCTACCCGTTTTTATGTGCGTGGACTGTAATCGGTACCCTATGGTTTCGAGACGCTAAAGACTGTTTGCCCGAAGAAGGACAGAAATGGGGCTTCCTCATTTGGTTGCTTTTCAGCTACTGTGCCCTTCTTTGCATTGCTTGCATGTCAGTTGGAAAGTGGTTAGCGCGTCGACAAGCACACTTGTTACGTGCCCAACAAGGCGTCCCCGTGTCTGAATATGGGGTACTTGTTGATATGATTCGGGTTCCTGATTGGGCGTTTGAAGCTGCAGGACTGGAAATACGAGGCGTTGGGCAAGATGCTATGGGGTACCATCCCGGGCTTTTCTTAACCTCGGCTCAGAGGGAAGCTGTGAAAGCTCTCATCCAGGAACTTCCGAAGTTCGGGCTGAAGGCGGTCCCGACGGATTGCAGTGAATGCCCGATTTGCCTCGAAGAGTTCCATGTAGGGAATGAGGTTCGCGGTATGCCGTGTGCTCACAACTTCCACGTCGAATGTATCGACGAGTGGCTTCGTCTGAATGTTAAATGTCCTCGGTGCCGCTCCTCCGTCTTCCCAAATCTCGACCTCAATGCTCTTTCTAACCTGCACTTGGACACAGAACAAACATCTGCCAATCGACCTTCAGCCACTCATTTCGACAGCGTCGAGAACGGTGGCTCGCCCGTGCCATCTGCTTCTCGACATTGA 975 48.51 MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFAFRLLLFIDNALSAGMGLDFGWHQQYAQFCGRVVVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEEGQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDWAFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVKALIQELPKFGLKAVPTDCSECPICLEEFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSANRPSATHFDSVENGGSPVPSASRH 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 834119 837567 + Carg06721-RA Car18g00155 165857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00155 324 MobiDBLite consensus disorder prediction 298 324 - -
Car18g00155 324 Pfam Ring finger domain 234 276 IPR001841 -
Car18g00155 324 ProSiteProfiles Zinc finger RING-type profile. 235 276 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00100 Car18g00155 CCT
Car10g00121 Car18g00155 CCT
Car13g00734 Car18g00155 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00734 Car-Chr13:8446837 Car18g00155 Car-Chr18:834119 4.13E-158 dispersed
Car18g00155 Car-Chr18:834119 Car15g00265 Car-Chr15:1452823 4.15E-13 dispersed
Car10g00121 Car-Chr10:569970 Car18g00155 Car-Chr18:834119 6.02E-172 wgd
Car11g00100 Car-Chr11:574218 Car18g00155 Car-Chr18:834119 4.63E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00155 K16284 - csv:101222360 613.609