Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00156 ATGAGGAATTTGAACTGGTTCAAGCCAATTTCGATCAATGGAAAGCCTGGGAGGAGGCTTTCTCTTGGGGAGTATGAGCGGGCTGTGTCATGGTCTAAGTATTTGGTGTCGTCTGGTGCAGAGATTAAGGGAGAAGATGAAGAAGAATGGAGTGCGGACATGTCTCAATTGTTTATTGGCTTTAAATTTGCTACAGGAAGGCATAGCAGGATTTACAGAGGTGTGTATAAGCAGAGGGAGGTTGCTATTAAGCTGATAAGCCAGCCTGAGCAGGACGAAAATTTGGCTATCTTTCTTGAGAATCAGTTCATTTCAGAGGTGGCATTGCTGTTTCGATTGAGGCATCCTAATATCATCACTTTCATTGCAGCTTGCAAGAAACCTCCAGTTTTTTGCATCATCACGGAGTACATGTCGGGCGGGTCGTTAAGAAAATACCTCCATCAGCAGGAGCCACATTCCGTTCCACTGAACTTGGTTCTGAAGCTAGCACTCGACATCGCTCGTGGGATGCGGTACCTTCATTCTCAGGGAATACTTCACAGAGATCTCAAATCAGAAAATCTCTTACTTGGTGAAGATATGTGTGTTAAGGTAGCAGATTTCGGTATCTCGTGCCTCGAATCTCAGTGCGGAAGCGCAAAGGGATTCACGGGAACATACCGGTGGATGGCACCCGAAATGATCAAAGAAAAACATCACACCAAGAAGGTTGATGTTTATAGCTTTGGCATTGTCTTGTGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAAGCAGCATTTGCAGTATGCCAGAAGAATGCAAGACCCCCTCTACCTTCGGCGTGCCCACAGGCATTTCGTCGCATGATCAAGAGATGCTGGTCGAAAAATCCCGACAAGCGACCACATTTTGACGAGATCGTTTCAAATTTGGAAACTTATATGGAGGCTTATAATGAAGATCCAGAATTTTTCTGTCACTATGTGCCTTCATCTAGATATACTACTGCTTTAAAATGCTTACCAACATGTATTACTGAACAATTATCTGCCTCTTTGAAGCCTAGGAGGAATTCATCATCTTAA 1086 43.92 MRNLNWFKPISINGKPGRRLSLGEYERAVSWSKYLVSSGAEIKGEDEEEWSADMSQLFIGFKFATGRHSRIYRGVYKQREVAIKLISQPEQDENLAIFLENQFISEVALLFRLRHPNIITFIAACKKPPVFCIITEYMSGGSLRKYLHQQEPHSVPLNLVLKLALDIARGMRYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKNARPPLPSACPQAFRRMIKRCWSKNPDKRPHFDEIVSNLETYMEAYNEDPEFFCHYVPSSRYTTALKCLPTCITEQLSASLKPRRNSSS 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 842274 845991 + Carg06722-RA Car18g00156 165858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00156 361 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00156 361 Gene3D Phosphorylase Kinase; domain 1 46 139 - -
Car18g00156 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Car18g00156 361 Gene3D Transferase(Phosphotransferase) domain 1 140 327 - -
Car18g00156 361 SUPERFAMILY Protein kinase-like (PK-like) 43 311 IPR011009 -
Car18g00156 361 Pfam Protein tyrosine and serine/threonine kinase 62 311 IPR001245 GO:0004672|GO:0006468
Car18g00156 361 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00156 361 CDD STKc_MAP3K-like 66 311 - -
Car18g00156 361 PANTHER SERINE-THREONINE PROTEIN KINASE 1 333 - -
Car18g00156 361 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Car18g00156 361 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Car18g00156 361 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Car18g00156 361 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Car18g00156 361 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Car18g00156 361 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 333 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00733 Car18g00156 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00517 Car-Chr3:5208374 Car18g00156 Car-Chr18:842274 3.77E-140 dispersed
Car03g01137 Car-Chr3:9152517 Car18g00156 Car-Chr18:842274 2.31E-114 dispersed
Car05g00693 Car-Chr5:4686215 Car18g00156 Car-Chr18:842274 2.03E-100 dispersed
Car07g00203 Car-Chr7:1135574 Car18g00156 Car-Chr18:842274 1.17E-116 dispersed
Car07g00289 Car-Chr7:1505471 Car18g00156 Car-Chr18:842274 4.31E-141 dispersed
Car12g00887 Car-Chr12:8769246 Car18g00156 Car-Chr18:842274 5.74E-100 dispersed
Car18g00156 Car-Chr18:842274 Car18g00352 Car-Chr18:2176811 1.15E-103 dispersed
Car13g00733 Car-Chr13:8442788 Car18g00156 Car-Chr18:842274 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89504 PF07714 PK_Tyr_Ser-Thr 1.90E-66 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00156 - - csv:101222762 694.886