Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00187 ATGTCTCAGGATTTGTCTTTGGATCAAGACCCAGATGAATCTGATCCTGAGTTCGTGGAGATTGATCCTACAGGTCGATATGGACGGTATAAGGAAATTTTAGGGAAAGGGGCATTCAAGAAAGTATATCGGGCTTTTGATGAATTGGAAGGAATTGAAGTAGCTTGGAATCAGGTTAAAGTAACAGATCTATTACGGAATTCTGAAGATTTGGAGCGACTTTATTCAGAAGTTCATTTGCTCAAGACATTGAAACACAAGAACATAATCAAATTTTACAATTCATGGGTTGATACGAAGAATGAAAACATTAACTTCATTACTGAGATATTCACTTCAGGGACACTTCGACAATATAGAAAGAAACACAAGCATGTTGATTTGAGAGCACTGAAAAAGTGGTCTAGGCAGATATTAGAGGGCCTTTTGTATCTTCATAGTCATGATCCTCCGGTTATTCATAGAGATTTGAAATGTGACAATATCTTTGTCAATGGCAACCAAGGTGAGGTGAAAATTGGTGACTTAGGACTTGCTGCCATTCTTCAACAAGCTCGTTCGGCTCACAGTGTCATTGGGACGCCAGAGTTTATGGCCCCAGAGTTGTATGAGGAGGAATACAATGAACTTGTGGATATTTATGCTTTTGGGATGTGTTTGCTTGAGCTTGTAACCTTTGAATATCCGTATATTGAATGTGCAAACGCTGCTCAAATCTATAAGAAGGTCACATCAGGGATAAAGCCAGCTTCATTGGCAAAGGTCACCGATGGGGGAGTTAGAGCATTTATAGAAAAATGTATTGCAAATGTCTCTGATCGCTTGCCTGCAAAAGATCTTTTAAGAGATCCATTTCTTCTAGCAGATGAAGAACATGAAAGTATATCACGTCATCTACATCCCAAAATACACCATAAAGAGAAAAGAGAACAAATTGATACTGATACAAGCGTAGATGATACTCCTGCTACTAGCGTAGACTTCAGCATGCATGGTCAAAGAAAAGATGTTAACAAGATATTTCTCAAACTAAGAATTGCAGACTCCATGGGTAATTTTCGCAATATCCATTTCCCATTTGATATTGAAGCCGACACATCAATTTCTGTTGCTAGTGAAATGGTTGAGGAGTTGGATCTTTCAGATCAAGATGTCTCTACGATTTCTGAAATGATCGAATCCGAAATTCGGTCGTATATTCCAGATTGGACATCAGTTGAGTATCCTGTAGATAATGTAGGAGCAGATGTTGTCATTTCTGATAGCTCTCCATCTGATTCAAGAACTGCTGCCTCTCCCTTATCTATAGAATCTGGTAACCTTGCATTAGAGGTCCTGCCTTCAGGTCGCAAGTATTGGTCCGACTCGCCGAAGGGAGTGGGCGGGTGCTCTCCCGTTAAGCCAGGTCCTTCAAACTTGTCTTTTGCCTCAGAACAGAATGTTGAATCCTCTAGTAGCCACATGCATGAGGATAACATAGATCATGCAGCCATAATCATGGGACTAGAAAATGAGCTTTTGTCTGAAGATGCTGCTAATGATGGGCAGGATGAGAGTATATTAACTACAGATATTCATGCTAGCTCTGAGGCACATCCCTCAGATTATGATGAATCAATTGGCATCGAGATAATGACCGAAAAACTCGAAAATTTGTTGACACAGCAAAAAGAAGAATTAGATGAACTGAAAATCAAACAGAAATTAGCCATTTCAGAGCTTCTGGCTGAACTTACACCTGAGACCCATCAGAAAGTTTTGAAGATATGTAAGCTTAAGCATTCTGATATGTAA 1794 39.58 MSQDLSLDQDPDESDPEFVEIDPTGRYGRYKEILGKGAFKKVYRAFDELEGIEVAWNQVKVTDLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQARSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYIECANAAQIYKKVTSGIKPASLAKVTDGGVRAFIEKCIANVSDRLPAKDLLRDPFLLADEEHESISRHLHPKIHHKEKREQIDTDTSVDDTPATSVDFSMHGQRKDVNKIFLKLRIADSMGNFRNIHFPFDIEADTSISVASEMVEELDLSDQDVSTISEMIESEIRSYIPDWTSVEYPVDNVGADVVISDSSPSDSRTAASPLSIESGNLALEVLPSGRKYWSDSPKGVGGCSPVKPGPSNLSFASEQNVESSSSHMHEDNIDHAAIIMGLENELLSEDAANDGQDESILTTDIHASSEAHPSDYDESIGIEIMTEKLENLLTQQKEELDELKIKQKLAISELLAELTPETHQKVLKICKLKHSDM 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1022231 1028778 - Carg06754-RA Car18g00187 165889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00187 597 Coils Coil 542 573 - -
Car18g00187 597 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00187 597 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 342 396 IPR024678 GO:0004674|GO:0005524
Car18g00187 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Car18g00187 597 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00699 Car18g00187 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00216 Car-Chr17:1308498 Car18g00187 Car-Chr18:1022231 2.99E-172 dispersed
Car18g00187 Car-Chr18:1022231 Car19g00278 Car-Chr19:3585697 1.05E-163 dispersed
Car20g00574 Car-Chr20:3222624 Car18g00187 Car-Chr18:1022231 6.39E-120 dispersed
Car13g00699 Car-Chr13:8297851 Car18g00187 Car-Chr18:1022231 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89506 PF00069 Pkinase 1.40E-49 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00187 K08867 - csv:101206177 1018.07