Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00217 ATGGCGGATCGAGATCGGAAGCTCAAAGAGGCGGGACATTCCGTTGATCCTCGGAGTGGTTTCTGTCCTCAAACCAAGATTTTCCATAGCCTCCGACCACCGCTCTCGGTTCCGCCGATATCTCAGCCTCTCACTGTTGTCGGACACGCACTTTCTATTCTTCGATCATCCCCTCCTCCGGTGAACACTACCGCCTTCGTTGATTTCGACTCAGGTGACAGTATCTCCTACGGTATTTTCCTCTGCCAAATCCGAAACCTCGCCTTTAATCTTAGAACTGTTTTCTCCCTCTTCAAGGGTCAAGTTGCTTTTATTCTTTCGCCGACGTCTCTGCGAGTTCCTGTGTTGTATTTTGCTCTGTTATCTCTCGGTGTTGTTGTCTCTCCGGCTAATCCAATCGGTTCTGAATCGGAGATTGCTCACCAGGTTCGACTCTGTAAACCGGACATTGCCTTCGTTACTTCCTCAACGGCGTCCAAGCTTTCGAGGGTTCCAGTGTCCACTGTCTTGATTGATTCAATGAAGTTTCTATCTATGATGAATGAAAGCAATCTATCGAATGGAGTGGATGATGATGCTGTTGATGTCAAAGTCGATCAAAACGACTCGGCGGCAATTCTGTACTCGTCAGGGACTACCGGGCGAGTGAAAGGAGTCTTACTGTCTCACAGGAACCTCATAGCGGCGATCTCTAGTGTTATGACATTAGAGGCGACGGCCAACGAAAGAGAGACGGAGCCGCATCCCGTTTCTCTGTACCTGTTACCTATGTTCCATGTTTTCGGATTCTATATGATGATTCGATCGATTTCAGAAGGCCATACGCTGGTTCTGATGCGAAAGTTCGGTTTCGAGGAAATGTTAAGAGCCGTGGAGAAGTATAGGGTTACATACATCCCGGTTTCTCCCCCGCTGGTGGTGGCGATGGTCAAGTCGGAGCTGGTGGCGAAGTACGATCTCAGCTCTCTTCAAATTTTGGGATGCGGTGGCGCTCCTCTTGGTAAAGAAGTCGTCGATAAATTCCATATTAAATTCCCCAACGTAGAAATTATACAGGGATATGGCTTGACAGAGAGTTCAGCAGCGGCGGCAAGGACTTTGGGGCCTGAAGAATGCAGTAATACAAGTTCAGTAGGTCGCTTATCTGAAAGTCTGGAAGCCAAAATAGTGGATCCTGCAACTGGAGAGGCCTTACCTCCTGGTCACAAGGGAGAGCTTTGGCTGCGAGGCCCAGGAATCATGAAAGGTTATGTTGGAGATGAGAAGGCAACTGCTGAAACGTTGCATCCGGAGGGATGGCTAAAAACTGGTGACCTTTGCTATTTTGATTCTGATGGATATCTCTATATTGTCGATAGATTAAAAGAATTGATCAAGTACAAGGCTTATCAGGTCCCACCAGCTGAACTAGAACATTTACTTCAATCCAACCCCGAGATCGCCGACGCTGCTGTCATACCCTACCCTGATGAAGAAGCTGGAGAGATTCCTATGGCTTATATTGTTAGAAAGCCTGGAAGCACTCTCACTGAAGCTCAAGTCATAGATTTCATTGCAAAACAGGTTGCACCGTACAAGAAAATCCGGAGGGTATCTTTTGTGAACACGATCCCAAAATCGCCTGCTGGGAAGATTCTTAGGAGGGAGCTTATAAAACATGCGCTCTCTCGTGGTTCTAGCAAGACAACCCTTCAAGGGATTTCTCTAACGGCCAAGGTCGACCATTTAAGTCTTTTGACTGATCCTTCAAGGCCCAATGAATTGGGATTTCCCTATTGGGCTAGGTCATTTCGGGGCAAGCGGATCATTTCTGATGAAGAGTGGACAACCCTTCAAGGGATTGCTCTAACGGCCAAGGTCGACCATTTAGGTCTTTTGACTGATCCTTCAAGAGGTTCGGACAACCCTTCAAGGGATTGCTCTAACGGCCAAGGTCGACCATTTAAGTCTTTTGACTGA 1959 47.52 MADRDRKLKEAGHSVDPRSGFCPQTKIFHSLRPPLSVPPISQPLTVVGHALSILRSSPPPVNTTAFVDFDSGDSISYGIFLCQIRNLAFNLRTVFSLFKGQVAFILSPTSLRVPVLYFALLSLGVVVSPANPIGSESEIAHQVRLCKPDIAFVTSSTASKLSRVPVSTVLIDSMKFLSMMNESNLSNGVDDDAVDVKVDQNDSAAILYSSGTTGRVKGVLLSHRNLIAAISSVMTLEATANERETEPHPVSLYLLPMFHVFGFYMMIRSISEGHTLVLMRKFGFEEMLRAVEKYRVTYIPVSPPLVVAMVKSELVAKYDLSSLQILGCGGAPLGKEVVDKFHIKFPNVEIIQGYGLTESSAAAARTLGPEECSNTSSVGRLSESLEAKIVDPATGEALPPGHKGELWLRGPGIMKGYVGDEKATAETLHPEGWLKTGDLCYFDSDGYLYIVDRLKELIKYKAYQVPPAELEHLLQSNPEIADAAVIPYPDEEAGEIPMAYIVRKPGSTLTEAQVIDFIAKQVAPYKKIRRVSFVNTIPKSPAGKILRRELIKHALSRGSSKTTLQGISLTAKVDHLSLLTDPSRPNELGFPYWARSFRGKRIISDEEWTTLQGIALTAKVDHLGLLTDPSRGSDNPSRDCSNGQGRPFKSFD 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1225556 1230019 - Carg06784-RA Car18g00217 165919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00217 652 Pfam AMP-binding enzyme 62 460 IPR000873 -
Car18g00217 652 ProSitePatterns Putative AMP-binding domain signature. 206 217 IPR020845 -
Car18g00217 652 Pfam AMP-binding enzyme C-terminal domain 469 544 IPR025110 -
Car18g00217 652 MobiDBLite consensus disorder prediction 627 652 - -
Car18g00217 652 MobiDBLite consensus disorder prediction 630 652 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00641 Car18g00217 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00641 Car-Chr13:8005520 Car18g00217 Car-Chr18:1225556 0 dispersed
Car18g00217 Car-Chr18:1225556 Car19g00158 Car-Chr19:1448505 7.84E-132 dispersed
Car10g00380 Car-Chr10:1891976 Car18g00217 Car-Chr18:1225556 6.79E-07 transposed
Car20g00046 Car-Chr20:267137 Car18g00217 Car-Chr18:1225556 1.26E-19 transposed
Car13g00640 Car-Chr13:8004455 Car18g00217 Car-Chr18:1225556 2.94E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00217 K01904 - csv:101211791 897.116