Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00228 ATGGCGACGACGACGACCAGTATTGGCGGCGATGGCGGCGGTGGAGGTGGTGGTGGCGGTGGTGAAGATAGAGTTATGGCTACGGCTCAGCAGATACTGAAGAGTCTCAACACTCCTAAGGAGGTTCGAGACGACATGCTTTTGATCTTCTCTAGCTTCGATAATCGTCTATCTAATATCACCAGTTTGGTCAACAGTGGAGATTCGAAGAGGGAGGGGGATCGATTTGAAGCTGCTGAGAAAGTGATTCTTCGTTGGGATTCCGGTCAGGGAGCTTCTCGGAACTCCCTGTTTTGGGAGGACGCGCCGGATGAGGCAGCGGAGTACTTATCGGCGGTGGATGATATTCTTCACAGGATGGACGAGTTGTCAATTCAGTCTGATTCGGCTAAGATCGTCGAGCGTGCTGAGAACGCGATCCAGATCGCTATGTCGCGGCTTGAGGATGAGTTTCGTCATATGTTGATTCGGAGCACTGTTCCGCTCGATGCGGAGCATCTCCACGGTTCAATTCGTAGGGTTTCCCTCTCTTTTGCTTCACACGAAGGCGAAAATTCCGATGAGTTCGAATCCTTTGCCGATGTTGACCGTGGTTCGGGGATTTTCCATGAGCGCGGTGTTAGTTTGGGCGACGATTTGCGCGTCGATTTGATCAATCCTGACGCCGTCGACGATCTGAAGGAGATCGCCGACCGGATGATTCGATCTGGATACGAAAGAGAGTGTCTGAATGTGTATATTAGCGTCCGCCGCGATGCTTTAGATGAGTGCTTGGTTGTTCTTGGAGTTGAGAAGCTTGGAATTGAGGATATCCAGAAAATTGACTGGAAATCTTTGGATGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTTCGAGTTCTTTTGACCGGCGAAAAACGACTCTGTGATTATATCTTTAGCGGTTCCGATGACTCTGAGGAAGCTTGTTTCAATGAGATTGCCAAAGGGTGCGTCAGGAAATTACTCAATTTTGCAGAGGCCATTGCTATAGGGGAAAGATCAGTCGAGAAGCTATTTCGAATTCTCGATATGTATGAAGCTCTGGCATACGTTCTACCGGACTTGCAGGCTATGGTTCCTGATGAATTCGTGATCGACGAGGCGAAGGGAGTGCTTTCTAGGCTGGGAGAGGCTGCTAAAGGTACATTTTGTGAATTTGAGAATGCTGTTCGTAGTGAGACTTCTAAGAAAACGATGCTAAATGCTGAGATTCATCCGCTCGCTCGTTACGTCATGAATTACTTAAGATTGCTTGTTGTTTATAGCAACACTCTGGATGAACTTTTAGAAGGCAATGACGACGAGGATTCGCATCGTCTAGGGGATGATGGTGGTGAGAATTTGGAGCTAGAAACCATGTCTCCATTAGCTCGTCGATTGTTTTCATTGATAGCGTCATTGGAGAGCAATCTTGAGAGGAAATCCAAACTTTATGCGGACGATTCGTTGCAATATATATTTCTCATGAACAATATACAATATATAGTGCAGAAAGTGAAAGATTCCGAGCTTGGGAAGCTCTTGGGTGACCGTTGGGTCCGTAAGCGTCGAGGCCAGGTTCGGGTATATGCAACGAGCTATCTAAGGGCTTCGTGGGGCAGATTGTTATCTTTCTTGAAGGAAGAAGGGACTGTTGGGAGCTCTAATAGTGCACTGAAACTAGCAGCTTTAAAGGAAAAATTCAAAAATTTCAATGCTGGCTTTGAGGAACTCTATAGAGTTCAGACAGGTTGGAAGGTAGCAGATCCTCAACTACGAGAAGAGCTTCGAATTTCGATATCGGCAAAGGCGTTACCTGCATATCGTGCCTTTGTGGGAAGGCATGGAAGTCAGATAGAGAACACGAGACATGCCGGGAGGTATATAAAGTACAGTTCGGACGACTTGGAGAACTATTTATTGGATTTGTTTGAAGGATCAGCTTGTGTTCTAAATCACTTGCGAAGAAAAAGTAGTTCATAG 1992 46.49 MATTTTSIGGDGGGGGGGGGGEDRVMATAQQILKSLNTPKEVRDDMLLIFSSFDNRLSNITSLVNSGDSKREGDRFEAAEKVILRWDSGQGASRNSLFWEDAPDEAAEYLSAVDDILHRMDELSIQSDSAKIVERAENAIQIAMSRLEDEFRHMLIRSTVPLDAEHLHGSIRRVSLSFASHEGENSDEFESFADVDRGSGIFHERGVSLGDDLRVDLINPDAVDDLKEIADRMIRSGYERECLNVYISVRRDALDECLVVLGVEKLGIEDIQKIDWKSLDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEACFNEIAKGCVRKLLNFAEAIAIGERSVEKLFRILDMYEALAYVLPDLQAMVPDEFVIDEAKGVLSRLGEAAKGTFCEFENAVRSETSKKTMLNAEIHPLARYVMNYLRLLVVYSNTLDELLEGNDDEDSHRLGDDGGENLELETMSPLARRLFSLIASLESNLERKSKLYADDSLQYIFLMNNIQYIVQKVKDSELGKLLGDRWVRKRRGQVRVYATSYLRASWGRLLSFLKEEGTVGSSNSALKLAALKEKFKNFNAGFEELYRVQTGWKVADPQLREELRISISAKALPAYRAFVGRHGSQIENTRHAGRYIKYSSDDLENYLLDLFEGSACVLNHLRRKSSS 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1303178 1305169 - Carg06795-RA Car18g00228 165930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00228 663 MobiDBLite consensus disorder prediction 1 23 - -
Car18g00228 663 Pfam Exo70 exocyst complex subunit 284 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00053 Car18g00228 CCT
Car11g00032 Car18g00228 CCT
Car13g00651 Car18g00228 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00010 Car-Chr13:108030 Car18g00228 Car-Chr18:1303178 2.64E-126 dispersed
Car13g00910 Car-Chr13:9418793 Car18g00228 Car-Chr18:1303178 7.15E-128 dispersed
Car14g01052 Car-Chr14:9233012 Car18g00228 Car-Chr18:1303178 2.67E-154 dispersed
Car15g00706 Car-Chr15:3929413 Car18g00228 Car-Chr18:1303178 1.92E-114 dispersed
Car10g00053 Car-Chr10:236582 Car18g00228 Car-Chr18:1303178 0 wgd
Car11g00032 Car-Chr11:171293 Car18g00228 Car-Chr18:1303178 0 wgd
Car13g00651 Car-Chr13:8066683 Car18g00228 Car-Chr18:1303178 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00228 K07195 - csv:101212753 1104.74