Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00266 ATGACTTCGAGAGGGGAAAGCGATGGGGAGTCTGAAATGAAGGGAAGCATGTGGGTTTTGGACCAGAAACTCGATCAACCAATGGATGAAGAAGCTGGGAGGCTTAACAATATGTACAAAGAAAAGAAATTCTCGGTATTGTTGCTTCTTCGACTTGCATATCAAAGCCTTGGAGTGGTTTATGGAGATTTGGGGACTTCTCCCCTCTACGTTTTTTACAATACATTTCCTCATGGAATTTCTGATCCGGAAGATGTAGTTGGAGCTCTTTCATTGATTATATACTCTCTCACTCTCATTCCTCTCATAAAATATGTATTTATCGTGTGTAAAGCCAATGACAATGGTCAAGGTGGAACATTTGCTCTCTACTCCTTGCTATGTCGTCATGCAAATGTAAAAACTATTCCGAACCAACATCGAAAGGATGAGGAGCTAACGACATATAGCCGCTCTAAGTTTCACGAGCAATCGTTTGCTGCTAAAACTAAAGGATGGCTTGAAAGACAATCATCCAGGAAGAATGCGTTGCTCATTCTTGTTCTTGTTGGCACTTCTATGGTTGTTGGAGATGGAATTCTCACGCCTGCAATTTCGGTTTTATCTGCTGCGGGAGGGATCAAAGTAAACAAACCCCATGTGAGCAGTGATGTAGTTGTGCTCGTTGCTGTTGCAATACTAGTAGGATTATTCAGCTTGCAACGCTATGGTACTGATAGAGTGGGTTGGCTCTTTGCCCCTGTTGTGTTACTTTGGTTTCTATTAATTGGAGGTATAGGCATGTTCAACATCTGGAAATATGATAGAACAATTCTAAGAGCCTTTTCACCTGTGTATATTTATCGCTATTTTAAAAGGCGAGGGATGGACGGTTGGACGTCCCTCGGAGGCGTTCTTCTGAGTATAACAGGCACAGAGGCTTTATTTGCGGATCTAGCTCATTTTCGTGTAGCTGCTATACAGATTGCTTTTACAGTATTTGTTTTTCCTTGCCTTCTCTTGGCCTATTCTGGACAAGCTGCCTATCTTATGAGCAATATGGAGCATGTTAATGATGTCTTCTATCGTTCAATCCCAGAGTCCATATATTGGCCAGTGTTTCTTGTGGCAACTGCTGCTGCTATAGTTGCTAGTCAAGCTACTATATCTGCAACATTTTCAATAATCAAGCAGGCTCTTGCTCATGGCTGCTTTCCAAGGGTTAAAGTTGTTCATACCTCGAAGAACTTTCTTGGTCAGATATATGTTCCTGACATTAACTGGATCCTCATGGTTCTTTGCATTGCTGTGACAGCAGGATTTAAGAATCAAAGTCAAATTGGAAATGCTTATGGGACAGCGGTGGTGGTAGTCATGCTTGTGACCACACTGCTTATGATTCTAATCATGATCTTGGTATGGCGCTGTCATTGGGTCATCGCCCTGATCTTCACCGGTCTGTCGCTAATCGTGGAGTGCAGTTACTTTTCTGCTGTTCTCTTCAAGGTTGATCAAGGTGGCTGGGTACCCCTTGTGATTGCTGCAGCCTTTCTTATCATCATGTATGTGTGGCATTATGGCACCGTTAAACGATACGAATTCGAGCTGCACAGTAAAGTTTCAATGGCATGGGTTCTCGGTCTTGGTCCGAGTTTAGGATTAGTCCGTGTTCCTGGAATTGGACTTGTATATACCGAGCTAGCAAGCGGCGTACCTCACATATTTTCCCATTTCATTACGAATCTCCCTGCCATCCATTCTGTCGTCGTGTTTGTTTGTGTGAAATACCTTCCAGTCTACACCGTGCCAGAGGAAGAACGATTCCTGGTAAAACGGATAGGACCAAAGAACTTCCACATGTTTCGTTGTGTCGCGAGATACGGTTATAAAGACCTCCACAAAAAGGATGACGACTTTGAGAAGAAGCTTTTTGATAGCATCTTCCTGTTTGTTAGGCTTGAATCCATGATGGAAGGTTGTTCAGACTCTGATGAGTACAGTTTATATGGTCAGCAAACTGAGCATTCAAGGGATGGCCTGTTGATTGGCACCAATGGAAATGCAACTACATCCAATGGGGACATGACATTCTCATCGGTTGACTCGATTGTGCCTGTTCGATCTCCGGTGCGTTCGAATAACACAGTAAGGTCATCTGGGCAGGCAAGCAACCATACGGATAGCGACGAGATTGAGTTCTTGATTAGGTGTAGAGATGCAGGGGTGGTGCATATATTGGGGAACACTGTAATTAGAGCAAGAAGGGAATCAAAATTCTACAAGAAGATAGCTGTGGATTATATATATGCATTTCTTAGAAAGATTTGCAGGGAGAACAGTGTGATTTTCAATGTTCCTCATGAGAGTTTATTAAACGTTGGCCAAATTTTCTATGTATAG 2379 42.79 MTSRGESDGESEMKGSMWVLDQKLDQPMDEEAGRLNNMYKEKKFSVLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGISDPEDVVGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHANVKTIPNQHRKDEELTTYSRSKFHEQSFAAKTKGWLERQSSRKNALLILVLVGTSMVVGDGILTPAISVLSAAGGIKVNKPHVSSDVVVLVAVAILVGLFSLQRYGTDRVGWLFAPVVLLWFLLIGGIGMFNIWKYDRTILRAFSPVYIYRYFKRRGMDGWTSLGGVLLSITGTEALFADLAHFRVAAIQIAFTVFVFPCLLLAYSGQAAYLMSNMEHVNDVFYRSIPESIYWPVFLVATAAAIVASQATISATFSIIKQALAHGCFPRVKVVHTSKNFLGQIYVPDINWILMVLCIAVTAGFKNQSQIGNAYGTAVVVVMLVTTLLMILIMILVWRCHWVIALIFTGLSLIVECSYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESMMEGCSDSDEYSLYGQQTEHSRDGLLIGTNGNATTSNGDMTFSSVDSIVPVRSPVRSNNTVRSSGQASNHTDSDEIEFLIRCRDAGVVHILGNTVIRARRESKFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1544318 1550964 + Carg06834-RA Car18g00266 165968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00266 792 Pfam K+ potassium transporter 54 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00696 Car-Chr13:8281703 Car18g00266 Car-Chr18:1544318 1.48E-11 dispersed
Car14g01219 Car-Chr14:10591000 Car18g00266 Car-Chr18:1544318 0 dispersed
Car16g00593 Car-Chr16:3760284 Car18g00266 Car-Chr18:1544318 0 dispersed
Car18g00266 Car-Chr18:1544318 Car11g01257 Car-Chr11:10436771 0 dispersed
Car13g00695 Car-Chr13:8277426 Car18g00266 Car-Chr18:1544318 9.68E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00266 K03549 - csv:101217915 1436.78