Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00348 ATGGCGGCTCTGAAACTCCCAATTCTTCTCCACTTCTTCTCCCTTCTTTTCTTCTCCATCTCCGCCGTCGATTTCGTCTTCAATGGCTTCAATTCCACTGATCTCTTCCTCTACGGCAACGCCACCGTCGAATCCTCTGTTCTTGCGCTCACAAACCAAACCAGTTTCTCAATCGGCCGCGCTCTGTACCCATCCAAAATCCCCACGAGAATCTCCAATTCCTCAACGGTTTTCCCTTTCTCCACTTCTTTCATCTTCGCCATGGCTCCTTTCAAGGATCTCCTCCCCGGTCATGGCTTCGTTTTCATCTTCGTTCCGGCCACCGGAATCTCCGGCACGGCCTCTGCTCAGAATTTAGGGTTTTTGAACTTCACGCTCAATGGAAACCCTAATAACCATGTTTTTGGAATTGAATTCGATGTGTTTGCTAATCCGGAATTCAATGATCCCGATGATAATCATGTCGGAATTAATTTGAATTCCTTGACCTCTAATTTCACCGGAGTTGCTGGGTTTTGGTCGGACGGCGGCTCGTTCAGTAGTTTCCGGCTTAATAGCGGCGGAAACTACCAAGTCTGGGTTGATTATTCCGATTTTGAGATGAACGTTACGATGGCTCCGGCGGGGATGAAAAAGCCACGGCGGCCGTTGATTAACGCCTCCCTGAATCTCTCGGAGATTTTCTTAGACGAAATGTACGTGGGGTTCACGAGCGCCACCGGCCATTTAGTTCAAGGTCACAACATCTTAGCATGGAGTTTTAGCAACTCCAATTTTTCATTGAGCGAGAGTTTGGTTACCATTGGATTGCCTTCCTTCATTCTCCCAAAAGACCCATTTACGAAGTCGAAATGGTTCATCGCCACCGTGACGGTTGGCGGATTTCTAGTTCTTTGTTTTATCGTTGGGACTTTGGGGATTTTGATCGCTGACCACCGGAGGAGAGCGAGGGCGAGAGCTGAAATGGAGGATTGGGAATTTGAATATTGGCCGCATCGAATCACATATCAAGAAATTGAATCAGCGACGAAAGGATTTGGTGAAGAAAATGTGATCGGAATTGGAGGGAACGGGAAAGTTCATAAAGGGGTTTTGGCCGGAGGAGGTTTAGAAGTTGCAGTGAAGCGAATTTCTCACGAAAACGACGGAATGCGAGAGTTCATATCTAAAATCACGAGCATAGGGAGATTGAAGCATAGGAATCTTGTTAGTTTGAGAGGTTGGTGTAAGAAAGAGAAGGAAAATTTCTTACTGGTTTACGATTACATGGAAAATGGAAGTTTAGACAAATGGATATTCGATTGCGACGAGACAAACATGTTGAGCTACGATGATCGAATTAGAATATTGAAAAATGTAGCCTCAGGGGTGTTGTATTTACACGAAGGATGGGAATCAAAAGTTCTTCACAGGAACATAAAAGCGAGCAATGTGTTACTAGACAAGGACATGAATGGAAGGCTAGGAGATTTTGGGTTGGCTCGAGTCCACAGCCATGGCCAAGTGGCTAGCACGACTAGGGTTGTTGGGACGATGGGTTACATTGCACCTGAGTTGGTTCGGAGCGGACGAGCCTCATCTCAATCAGACGTATTTAGTTTTGGTATCTTGATTCTAGAAGTGATGTGTGGGAGGAGACCAATTGAGGAAGGAAAGCCATTGTTAATAGATTGGGTTCAACGGTTGGACGTCGAAGGGGAGTTGACTGCAGCACTCGATGGGAGGTTGAGGAAGAAGGGCGGGTGGAATGAGGAGGAAGTGAAGAGAGTGTTGCATTTGGGATTGTTGTGTGCATACGTTAACCCGAACGCTCGACCGACGATGAGGCAAATAGTGAAAATTTTGGAATGGAAGGTCAAGTTGGATGAGAATGAGAGTATAAACGCTTATTTGGTTCAAAGATTGAAATCACCCGGAATGTGGTGTGATTCAAGCGTTGGTTTTGGGCATACATTGCATCATCCAACTTTTGAGGATTTTCTTCACTCTTCTTCAACTTCCCTCTCTTGGTCTGCTTCGATCGTCGCTTCGGCTTCCAGGTGA 2043 46.06 MAALKLPILLHFFSLLFFSISAVDFVFNGFNSTDLFLYGNATVESSVLALTNQTSFSIGRALYPSKIPTRISNSSTVFPFSTSFIFAMAPFKDLLPGHGFVFIFVPATGISGTASAQNLGFLNFTLNGNPNNHVFGIEFDVFANPEFNDPDDNHVGINLNSLTSNFTGVAGFWSDGGSFSSFRLNSGGNYQVWVDYSDFEMNVTMAPAGMKKPRRPLINASLNLSEIFLDEMYVGFTSATGHLVQGHNILAWSFSNSNFSLSESLVTIGLPSFILPKDPFTKSKWFIATVTVGGFLVLCFIVGTLGILIADHRRRARARAEMEDWEFEYWPHRITYQEIESATKGFGEENVIGIGGNGKVHKGVLAGGGLEVAVKRISHENDGMREFISKITSIGRLKHRNLVSLRGWCKKEKENFLLVYDYMENGSLDKWIFDCDETNMLSYDDRIRILKNVASGVLYLHEGWESKVLHRNIKASNVLLDKDMNGRLGDFGLARVHSHGQVASTTRVVGTMGYIAPELVRSGRASSQSDVFSFGILILEVMCGRRPIEEGKPLLIDWVQRLDVEGELTAALDGRLRKKGGWNEEEVKRVLHLGLLCAYVNPNARPTMRQIVKILEWKVKLDENESINAYLVQRLKSPGMWCDSSVGFGHTLHHPTFEDFLHSSSTSLSWSASIVASASR 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2145325 2147367 + Carg14627-RA Car18g00348 166050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00348 680 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Car18g00348 680 Pfam Legume lectin domain 23 258 IPR001220 GO:0030246
Car18g00348 680 Pfam Protein kinase domain 348 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00348 680 ProSiteProfiles Protein kinase domain profile. 346 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00101 Car-Chr14:517786 Car18g00348 Car-Chr18:2145325 9.95E-158 dispersed
Car14g00102 Car-Chr14:521162 Car18g00348 Car-Chr18:2145325 3.44E-161 dispersed
Car11g01570 Car-Chr11:12476942 Car18g00348 Car-Chr18:2145325 0 wgd
Car13g00526 Car-Chr13:7275249 Car18g00348 Car-Chr18:2145325 0 wgd
Car18g00348 Car-Chr18:2145325 Car19g00784 Car-Chr19:8513560 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89515 PF00069 Pkinase 2.20E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00348 - - csv:101222577 1044.26