Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00370 ATGAAGACGTCGGGCGCTGAAGGAGGAGGCGCTCTGAATCTCTGCAACTCTGCAACAACACGCCCATTTCACACACCCACCGGAGAAGCTCCGACCATGCTTCTCCTTATCTTCCTCTCCGCCTTCCTCTCAAACCCTTCTCTCCTCTCCCTCTCCCTCTCCCAAGAAGGCCTCTATCTCCACACCGTTAAGCTCTCCCTCGACGACCCTGATTCCGCCCTCCGCTCATGGAACGACCGCGACGACACTCCCTGCTCCTGGTTCGGCGTCTCTTGCGACCCCACAACCAACTCCGTCCACTCCCTCGACCTCTCCAACACCAACATCGCAGGCCCATTTCCTTCCCTTCTTTGCCGTCTCCAGAATCTCTCTTCCATTTCTCTCTACAATAATTCCATCAACATGACCCTTCCCTCTACTATTTCCGAGTGTTCTAGTCTCCAGCATCTCGACCTCTCTCAGAATCTCCTCACCGGCGAGCTACCCACTTCCATTTCTGATCTCCCCAACCTCCGGTATTTGGATTTAACTGGGAATAACTTCTCCGGCGACATTCCGCCGAGTTTTGCTCTGTTTCGAAAGTTGGAGGTTCTGTCTCTGGTTTATAATCTTCTCGATGGACCGATGCCAGCGTTTCTCGGTAACATTACAACGTTGAAGATGTTGAATCTGTCGTACAACCCATTTGCGCCGAGCCGGATCCCGCCGGAGTTTGGGAATTTGACGAATCTTGAGGTTCTTTGGCTGACTCAGTGTAATTTAATTGGGGAAATTCCGCCGTCTCTTGGTCGGTTGAAACGGCTGACCGATTTGGACTTGGCGTTGAATAATCTTTATGGTCCTATTCCAAAATCGTTGACGGAGTTGAGTAGTGTGGTTCAGATTGAGCTGTATAACAACTCGTTAACAGGGGAATTGCCTTCTGGGTTTTCGAATCTGACCTCATTACGGCTGTTTGATGCATCGATGAACGGTTTAAATGGAGTGATTCCGGATGAGTTGTGTCGGTTGCCGCTTGAGAGTCTCAATCTCTATGAGAATAAGTTGGAGGGTATGTTACCGGAAAGCATTGCGAACTCGCCGGGCTTGTATGAACTCAGACTGTTCAGTAACCGGCTCACCGGCGAGTTACCGCGAAATCTTGGGAAGAACTCGCCGCTGCGATGGATTGATGTTTCCGACAACCAGTTTTCCGGGGAACTCCCAGGGGATTTGTGTGAGAAAGGCGAGTTAGAGGAGCTTCTAATGATCAACAACAACTTTTCCGGGGATCTTCCGGCGAGTTTAGGTGGATGCGAGAGTTTAACAAGGGTCCGATTGGGTTACAATCGGTTTTCCGGCGAGGTTCCGCCGCGATTTTGGGGGCTCCCACATGTTTATCTATTCGAACTAGTGAGCAACTCGTTTTCCGGGGGAATTTCCGATGACATTGCCACTGCGAAGAACCTTTCGATTTTCATTATCTCGAAGAACAACTTCACCGGCACGATTCCGGCGGAGATTGGGGAGCTGGAGAATCTTGTGAAATTGTTAGCGACTGATAACAAACTCAATGGATCTTTACCAGAAAATCTTGCGAATCTCAGGAAGCTTTCGAGTTTGGATCTTCAAAATAATGATCTCTCTGGCGAACTTCCCAATGGAATCAAATCCTGGAGGAATCTCAACGAACTCAATTTAGCAAACAATGAATTTTCCGGCGAAATCCCTGAAGAAATCGGCGCTTTGCCGGTTCTTAATTACCTCGATCTATCTGGGAATCAATTTTCCGGCAACATCCCAAATGGGTTACAGAATTTGAATCTAAATCTCCTGAATCTCTCAAACAATCGGTTGTCCGGTGAGCTTCCGCCGTTCTTAGCCAAAGGAAACTACGGAAACAGCTTTCTGGGGAACCCAGATCTGTGTGGACATTTGGAAAGATTATGCAATAACAAAGATGAATCGAAGAGCGAAGGCTATCTCTGGTTGCTGCGTTCGATCTTCTTCCTCGCGAGTATCGTGTTCATCGTCGGCGTCGTCTGGTTTTACCTCAGATACCGAAAGTTCAAGCTGGCTAAGAGAGAAATGGAGAAGGGGAAATGGACATTGATGTCGTTTCACAAGCTGGATTTCAGTGAATATGAGATATTGGATTGTCTTGATGAAGATAACATTATAGGTAGTGGCTCTTCTGGTAAAGTTTATAAGGTTGTTCTCAACAATGGCGAGGCGGTCGCCGTGAAGAAACTGTTCGGAGGGATGAAGAAAGAAGGTGGCGGCGGGGGTGGCGGTGGCGGCGACGTCGAGAAGGGTCAAGTTCAAGACAATGGCTTCGAAGCCGAAATCGAAACGTTGGGGAAGATAAGGCATAAGAACATTGTGAAGTTATGGTGTTGTTGCATTACTAGAGATTACAAGCTTTTGATCTATGAGTATATGGTTAATGGAAGCTTGGGAGATTTGCTTCATAGTAGTAAAAAAGGATTGCTGGATTGGCCTACTAGGTTTAAGATTGCTTTGGATGCTGCTGAAGGGCTTTCTTATCTTCATCACGATTGTGTCCCTCCGATCGTACATCGAGACGTTAAGTCCAACAATATCTTGTTGGATAGTGATTTCGGAGCTAGGTTGGCGGATTTCGGTGTAGCTAAGGTCATTGATTCGACTCCGATGGGACCGAAATCCATGTCGGTCATCGCGGGGTCTTGCGGTTACATTGCACCAGAGTATGCTTACACACTCCGAGTGAACGAGAAGAGCGACATATACAGTTTCGGCGTGGTGATCCTAGAGCTGATAACGGGGAGACTCCCGATCGATCCGGAGTTCGGGGAGAAGGATTTAGTGAAATGGGTATGTTTCAAATTAGACCAAGAAGGGATTGAGCAAGTAATGGACACCAAACTAGAGAGTTGTTTCAAGGAAGAGATATGCAGAGTGCTAAACATAGGGCTGCTGTGCACCAGCCCTCTGCCCATCAACCGGCCATCGATGAGGAAAGTGGTGAAGATGCTGCAAGAAGTAGGCGCGGCGGACAACCAAATGAAAGGCAGCAGCAACAACAAGGATGGGAAATTAACGCCATATTATTACGAAGAAGATGCTTCAGATCAGGGAAGTGTAGCAGCAGCAGCATCATAG 3123 47.93 MKTSGAEGGGALNLCNSATTRPFHTPTGEAPTMLLLIFLSAFLSNPSLLSLSLSQEGLYLHTVKLSLDDPDSALRSWNDRDDTPCSWFGVSCDPTTNSVHSLDLSNTNIAGPFPSLLCRLQNLSSISLYNNSINMTLPSTISECSSLQHLDLSQNLLTGELPTSISDLPNLRYLDLTGNNFSGDIPPSFALFRKLEVLSLVYNLLDGPMPAFLGNITTLKMLNLSYNPFAPSRIPPEFGNLTNLEVLWLTQCNLIGEIPPSLGRLKRLTDLDLALNNLYGPIPKSLTELSSVVQIELYNNSLTGELPSGFSNLTSLRLFDASMNGLNGVIPDELCRLPLESLNLYENKLEGMLPESIANSPGLYELRLFSNRLTGELPRNLGKNSPLRWIDVSDNQFSGELPGDLCEKGELEELLMINNNFSGDLPASLGGCESLTRVRLGYNRFSGEVPPRFWGLPHVYLFELVSNSFSGGISDDIATAKNLSIFIISKNNFTGTIPAEIGELENLVKLLATDNKLNGSLPENLANLRKLSSLDLQNNDLSGELPNGIKSWRNLNELNLANNEFSGEIPEEIGALPVLNYLDLSGNQFSGNIPNGLQNLNLNLLNLSNNRLSGELPPFLAKGNYGNSFLGNPDLCGHLERLCNNKDESKSEGYLWLLRSIFFLASIVFIVGVVWFYLRYRKFKLAKREMEKGKWTLMSFHKLDFSEYEILDCLDEDNIIGSGSSGKVYKVVLNNGEAVAVKKLFGGMKKEGGGGGGGGGDVEKGQVQDNGFEAEIETLGKIRHKNIVKLWCCCITRDYKLLIYEYMVNGSLGDLLHSSKKGLLDWPTRFKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDSDFGARLADFGVAKVIDSTPMGPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELITGRLPIDPEFGEKDLVKWVCFKLDQEGIEQVMDTKLESCFKEEICRVLNIGLLCTSPLPINRPSMRKVVKMLQEVGAADNQMKGSSNNKDGKLTPYYYEEDASDQGSVAAAAS 1040
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2281232 2285341 + Carg14605-RA Car18g00370 166072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00370 1040 MobiDBLite consensus disorder prediction 1007 1040 - -
Car18g00370 1040 Pfam Leucine rich repeat N-terminal domain 54 93 IPR013210 -
Car18g00370 1040 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Car18g00370 1040 Pfam Protein kinase domain 716 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00370 1040 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Car18g00370 1040 ProSiteProfiles Leucine-rich repeat profile. 170 192 IPR001611 GO:0005515
Car18g00370 1040 ProSiteProfiles Protein kinase domain profile. 714 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00370 1040 Pfam Leucine Rich Repeat 579 600 IPR001611 GO:0005515
Car18g00370 1040 Pfam Leucine Rich Repeat 243 264 IPR001611 GO:0005515
Car18g00370 1040 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00509 Car18g00370 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00796 Car-Chr4:4595252 Car18g00370 Car-Chr18:2281232 0 dispersed
Car11g01485 Car-Chr11:11993793 Car18g00370 Car-Chr18:2281232 0 dispersed
Car18g00370 Car-Chr18:2281232 Car19g00389 Car-Chr19:5706454 0 dispersed
Car13g00509 Car-Chr13:7177936 Car18g00370 Car-Chr18:2281232 0 wgd
Car18g00370 Car-Chr18:2281232 Car03g01156 Car-Chr3:9234438 5.17E-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89517 PF00069 Pkinase 5.60E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00370 - - cmos:111457094 1893.24