Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00374 ATGCCTGTCTCTTCTTTATCTTCTTCTTCTTCCCCTCTCTCTCCCCTCTGTTTTCTCACTCTGCTTCTCATTTTCATCACACCATCAGAGTGTGCTGCAACACCAGCACCTAAAAAGGCCCCCGCCCGCCGCCACCGCCTCCTCTCTGTCGACTACTACACCAAAACATGCCCTCACCTCGAGCAACTCGTCTCCTCAATCACCACTCAACAGTTCAGAGACGCACCAGTCTCAGCTCCAGCAACACTCCGCCTGTTCTTTCATGATTGCTTTGTAGAAGGCTGTGATGGGTCGATTCTGATATCGACGAAGCCTGGCAGCAAAGTGGCAGCGGAGAAGGATGCAGCGGACAACAAGGGGCTGAGACCGGAGGGGTTTGAAAGCATCAAGAAGGCCAAGGCGTTGGTTGAGAGCAAGTGCCCTGGCGTTGTGTCTTGTGCTGACATCCTCGCAATTGCAGCCAGAGATTTTGTCCATTTGGCAGGAGGACCGTATTACCAGGTGAAGAAGGGACGATGGGACGGGAAGATATCAATGGCGGCCAGAGTAGGTTCCAATCTGCCGCAAGCAAACTCCACCGTTGATCAGCTTCTCAAACTCTTCAATTCCAAAGGTCTATCAAGCGATGACCTCGTTGTGCTCTCCGGTGCGCACACGATCGGATTTGCGCACTGCGAGCATTTCACAAACCGTCTCTACGACTACAGAGGCACGAAAAAACCGGATCCGGCGATCGACGGGAGACTACTCAAGGAGCTTAAAATGTCGTGCCCTAGGTACGGTGGAAATACGGATATAGTGGCGCCGTTCGATGTAACAACACCGTTTGTGTTCGATCACGCGTACTACGGGAATTTGGAAAGTAAACTAGGGCTGTTGGCTACGGATCAAGCTCTGGTATCGGATGCGAGGATGAAGACGATGGTGCAGAGCTTGGCGAAAGATAAGCAGAAGTTTTTTCAAGCTTTCGCGGCGGCGATGGAGAAAATGGGGTCGATCGGAGTGAAGAGGGGGCGACGACATGGAGAGCGACGGACGGATTGTAGCGTTCATCAGAGTTGA 1062 52.45 MPVSSLSSSSSPLSPLCFLTLLLIFITPSECAATPAPKKAPARRHRLLSVDYYTKTCPHLEQLVSSITTQQFRDAPVSAPATLRLFFHDCFVEGCDGSILISTKPGSKVAAEKDAADNKGLRPEGFESIKKAKALVESKCPGVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMAARVGSNLPQANSTVDQLLKLFNSKGLSSDDLVVLSGAHTIGFAHCEHFTNRLYDYRGTKKPDPAIDGRLLKELKMSCPRYGGNTDIVAPFDVTTPFVFDHAYYGNLESKLGLLATDQALVSDARMKTMVQSLAKDKQKFFQAFAAAMEKMGSIGVKRGRRHGERRTDCSVHQS 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2301922 2304155 - Carg14601-RA Car18g00374 166076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00374 353 ProSitePatterns Peroxidases active site signature. 79 90 IPR019794 GO:0004601
Car18g00374 353 Pfam Peroxidase 69 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 CDD secretory_peroxidase 48 350 IPR033905 GO:0004601|GO:0042744
Car18g00374 353 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Car18g00374 353 PANTHER PEROXIDASE 19 37 348 - -
Car18g00374 353 Gene3D - 51 350 - -
Car18g00374 353 PANTHER PEROXIDASE 25-RELATED 37 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Haem peroxidase superfamily signature 79 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Haem peroxidase superfamily signature 144 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Haem peroxidase superfamily signature 271 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Plant peroxidase signature 57 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Plant peroxidase signature 81 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Plant peroxidase signature 124 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Plant peroxidase signature 269 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Plant peroxidase signature 285 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 PRINTS Plant peroxidase signature 325 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 Gene3D Peroxidase, domain 2 188 330 - -
Car18g00374 353 ProSiteProfiles Plant heme peroxidase family profile. 47 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00374 353 SUPERFAMILY Heme-dependent peroxidases 48 350 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00374 Car-Chr18:2301922 Car20g00854 Car-Chr20:6624753 5.24E-88 dispersed
Car18g00374 Car-Chr18:2301922 Car15g00080 Car-Chr15:483529 3.45E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00374 K00430 - csv:101216263 623.239