Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00395 ATGGAGAAAAAGGGTACCATTTTAATGCAAAGATATGAGCTTGGGAGGCTTCTTGGACAGGGAACTTTCGCGAAAGTCTACCATGCTCGTAATCTCAAGTCAGGCCAGAGCGTGGCGATTAAGATTATTGATAAAGAGAAAGTGCTGCGTGGTGGGTTGATCGATCAAATCAAGAGGGAAATCTCTGTGATGCGCCTTGTCCGCCATCCTAATGTGGTGCAGCTCTATGAGGTGATGGCTAGCAAGACCAAGATCTATTTTTCCATGGAGTTTGTCAAAGGTGGGGAGCTTTTTAACAAAGTGGCTCGAGGGAAGCTCAAGGAAGATGCTGCTCGTAAGTACTTTCAGCAGCTCATTGGTGCTGTTGATTATTGTCATAGCCGTGGTGTGTATCATAGAGATATCAAGCCTGAGAATCTCCTTCTTGATGAGTTTGGGAATCTTAAGATTTCGGATTTTGGGTTGACTGGTTATCTCCCTTTCAACGAACAAAATCTAATGGAAATGTACAAAAAAATCACCAGAGGAGAATTCAAATGCCCTCAATGGTTTCCCCCAGAAGCTCGCAAGCTCCTCTCAAGAATCCTCAATCCATGTCCTTTCACAAGAATAAACATGGCCACACTCATGGAAAATTCCTGGTTCAAAAAGGGTTTCAAGGCAAATGTAGCAACTCCAAAACCCCTTCAAATCAAAGGCGGCGTCTCGTCCATAAGCGATGTCGAGGTCGCTTTAGACGAGGGAAGCTCTGTTAGTAATAGCAGCATTGAGAGTGGAAGGCCACCAACAAGAACTAATTCCTTCAATGCATTTGATATCATATCCCTCTCACAAGGTTTTGATCTGTCAGGTTTGTTTGAGAATGATATGAATGAGAGGCCACCGACACGGTTCACTACGACGAAACCAGCATCGACGATCGTGTCGAAGTTTGAAGAGATAGCAGAGATGGAGAGGTTCAAAGTGATGAAGAAAGATGGGATGGTGAAACTCCAGGGAAGTAAACAAGGAAGAAAAGGGCAGTTGGGTATTGATGCTGAGATATTTGAAGTGACACCTTCTTTTTTTGTGGTGGAGGTCAAGAAAACTGCAGGAGACACCTTGGAATACAAGCAATTTTATAACAAAGACATGAAGCCTTGCCTTAAGGACATCGTGTGGGCTTGGGAAGGAAACGAGCAACAACAGCAACAACAACCGCAGCCGCCGCAGCCGCAGCTCCAAATCCATAATAGATGA 1239 44.47 MEKKGTILMQRYELGRLLGQGTFAKVYHARNLKSGQSVAIKIIDKEKVLRGGLIDQIKREISVMRLVRHPNVVQLYEVMASKTKIYFSMEFVKGGELFNKVARGKLKEDAARKYFQQLIGAVDYCHSRGVYHRDIKPENLLLDEFGNLKISDFGLTGYLPFNEQNLMEMYKKITRGEFKCPQWFPPEARKLLSRILNPCPFTRINMATLMENSWFKKGFKANVATPKPLQIKGGVSSISDVEVALDEGSSVSNSSIESGRPPTRTNSFNAFDIISLSQGFDLSGLFENDMNERPPTRFTTTKPASTIVSKFEEIAEMERFKVMKKDGMVKLQGSKQGRKGQLGIDAEIFEVTPSFFVVEVKKTAGDTLEYKQFYNKDMKPCLKDIVWAWEGNEQQQQQQPQPPQPQLQIHNR 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2439682 2442303 + Carg14579-RA Car18g00395 166097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00395 412 ProSiteProfiles Protein kinase domain profile. 12 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00395 412 ProSiteProfiles NAF domain profile. 263 287 IPR018451 GO:0007165
Car18g00395 412 Pfam NAF domain 266 324 IPR004041 GO:0007165
Car18g00395 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Car18g00395 412 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Car18g00395 412 Pfam Protein kinase domain 12 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00395 412 MobiDBLite consensus disorder prediction 392 412 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00395 Car-Chr18:2439682 Car07g01185 Car-Chr7:7195590 1.33E-169 dispersed
Car13g00481 Car-Chr13:7049770 Car18g00395 Car-Chr18:2439682 0 wgd
Car18g00395 Car-Chr18:2439682 Car07g00152 Car-Chr7:901940 9.96E-145 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89519 PF00069 Pkinase 6.80E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00395 K07198 - csv:101206082 643.654