Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00409 ATGACATCAGGGAACAGAATGCCGACTTGGAAGGAGAGGGAGAATAACAAGCGGCGTGAGAGGCGCCGCCGTGCCATCGCCGCTAAGATCTTTCTCGGTTTGCGAATGTATGGCAACTACAAGCTTCCCAAGCACTGCGACAACAATGAGGTCCTCAAAGCCCTCTGCAATGAAGCTGGATGGACTGTTGAGGAAGACGGCACTACCTATCGGAAGGGATGCAAGCCTGTGGAACGTGATATCATGGGTGGATCAGCTTCTGCAAGTCCATGTTCATCGTACCAGCCGAGCCCATTTACGTCTTATAACCCAAGTCCTGCATCTTCTTCCTTCCCAAGCCCCACCTCTTCCCGTTACGCCATTATAGGCAATGGCAATACTGCCGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTCTCCTCAGGTTCATCATCAGCTTCTTCCCGGCTGCCTCATTATAATCATTACATAACTGGCGGCTCTATAAGTGCACCTGTCAGCCCTCCGTCGAGCTCCCCAACCGCTCGAACACCCAGAAAACCAAATGATTGGGACAATCATCCTGCAGCTGCTCCAGCTTGGGCAGCACAGCACTTCTCATGCATGGCGACCCCACCAAGCCCTGGGCGTCAGGCATTGCCTGATTCGGCATGGCCTGATAGTATGCGGATTCCTCAAAGTGGACCATCTTCTCCAACCTTCAGCCTTGTGGCAAGGAATCCATTTGGATTCAAGGAGGCAATGTCTGCTGGAGGATCTCGTAACTGGACTCCTGCACAGAGTGGGACGTGCTCGCCCACCGTCACTGCAGGTGCCGATCATACTTCAGATGTTCTAATGACAGATGAAAGTGTGGCGGAGTTTGCCTTCGGAAGTTGTTCGGTTGGGTTAGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTTGAACTTACACTTGGGAATTCAAGAACAAGG 978 51.94 MTSGNRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPFTSYNPSPASSSFPSPTSSRYAIIGNGNTADPNSLIPWLKNLSSGSSSASSRLPHYNHYITGGSISAPVSPPSSSPTARTPRKPNDWDNHPAAAPAWAAQHFSCMATPPSPGRQALPDSAWPDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGSRNWTPAQSGTCSPTVTAGADHTSDVLMTDESVAEFAFGSCSVGLVKPWEGERIHEECISDDLELTLGNSRTR 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2553612 2556108 + Carg14565-RA Car18g00409 166111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00409 326 MobiDBLite consensus disorder prediction 162 190 - -
Car18g00409 326 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 141 IPR008540 -
Car18g00409 326 MobiDBLite consensus disorder prediction 1 20 - -
Car18g00409 326 MobiDBLite consensus disorder prediction 202 221 - -
Car18g00409 326 MobiDBLite consensus disorder prediction 85 115 - -
Car18g00409 326 MobiDBLite consensus disorder prediction 250 269 - -
Car18g00409 326 MobiDBLite consensus disorder prediction 86 115 - -
Car18g00409 326 MobiDBLite consensus disorder prediction 254 269 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00463 Car18g00409 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00394 Car-Chr16:2419196 Car18g00409 Car-Chr18:2553612 1.17E-114 dispersed
Car18g00409 Car-Chr18:2553612 Car18g00476 Car-Chr18:3176740 2.49E-17 dispersed
Car13g00463 Car-Chr13:6967221 Car18g00409 Car-Chr18:2553612 4.78E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5155 PF05687 BES1_N 1.80E-66 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00409 - - csv:101204637 491.886