Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00415 ATGCTGTCAAACAACCATAACAACAGTCCTCCTACTCCTAGAACCAGATTGGAAAGGCTTCTTAGGGAGAGAGAGCTTAGGAGATCAAACCGGTCTTCTCTCAATGAAGAAGCTCACAGTCTGGGAGAATTCAACAGTTATGATCTGTTCTCTTTTTCTGGTGATAGTTGTGGGTCATTTAACGAGGAAGATATCTTAGAAGGGGTGTCAGTGGTAAAAGACATCATTGATGGGTTTCAAAGGCTAGAAGGGAGGACTTCTAAACAGCGCCTTCTAGTTGTAGCAAACAGATTGCCTGTGTCTGCTGTCAGGAAAGGGAAGGAGACATGGCATCTTGAAATTAGCGTTGGTGGTTTAGTCAGTGCACTTTTAGGACTAAAGGAGTTTGAGGCAAGATGGATTGGTTGGGCTGGTGTGAATGTACCTGACGAAGTTGGACAGAGAGCCTTAGAGAAAGCATTAGCTGAAAAGAAATGCATACCGGTCTTTCTTGATGAAGAGATCGTTCATCAGTATTACAATGGCTACTGTAACAACATATTGTGGCCTCTATTTCATTATCTTGGTCTTCCACAAGAAGACCGACTTGCAACAACACGAAGTTTTCAGTCACAGTTTGATGCATATAAGAAGGCAAACAAAATGTTTGCTGATGTTGTAAACAAACATTATGAAGAGGGAGATGTTGTTTGGTGTCATGATTATCACTTGATGTTTCTCCCAAAATGTCTCAAAGAGCATAATCGTAAGATGAAAGTTGGTTGGTTCCTTCACACCCCATTTCCATCGTCAGAAATACATAGAACTCTACCATCTCGGTCAGAGCTTTTGAGAGCTGTTCTTGCTGCTGATTTAGTTGGTTTCCACACATATGATTATGCCAGGCATTTTGTTAGTGCCTGCACCCGTATTCTTGGGTTGGAGGGTACACCTGAAGGAGTAGAGGATCAAGGAAAGCTGACTCGCATAGCTGCTTTTCCTATTGGAATAGATTCTGATCGATTCATTCGAGCTCTTAAACTTCCTCAAGTCCAGGATCACATTAAAGAACTTCAAGAAAGATTTGCTGGACGAAAGGTAATGTTGGGTGTTGATCGTCTTGATATGATTAAGGGAATACCCCAAAAGATTCTGGCTTTTGAAAAATTTCTTGAAGAAAATCCGAAGTGGCGCGATAAAGTAGTTTTGCTGCAAATTGCTGTGCCAACAAGGACAGACGTTCCTGAGTATCAAAAGCTAACAAGTCAAGTTCATGAGATTGTTGGGCGTATTAATGGGAGGTTTGGCACTCTTACTGCAGTTCCAATACATCATCTGGATCGTTCACTTGACTTCCCTGCATTATGTGCTTTATATGCTGTCACTGATGTGGCACTAGTTACATCTTTAAGAGATGGAATGAATCTTGTGAGCTATGAGTTTGTTGCCTGTCAAGCTTCCAAGAAAGGTGTTCTTATTCTGAGTGAGTTTGCTGGTGCAGCACAGTCATTAGGTGCTGGTGCTGTTTTAGTTAATCCATGGAATATCACTGAAGTTGCTGCTTCAATTGGTTATGCTTTGAATATGGAAGCTGATGAAAGAGAAAGGCGACACCTTCATAACTTCATGCACGTTACAACTCACACATCCCAAGAATGGGCTGCAACATTTGTGAGCGAACTCAACGACACCGTAGTTGAAGCTCAGATCAGGACCAGACAGATACCACCTTTACTTCCAATTAATGAGGCAGCGAACAGTTATTCGCGATCACATAATCGATTGGTTATTCTGGGTTTCAATGCTACCTTAACCGAAGCAGTTGATGCCCTCGGAAGAAGATGTGGCCAAATTAGAGACATGGATCTTAAAGTACATCCAGATGTGAGAGAGCCCTTGAAGAAGCTTTGTGATGACCGGAATACGACAGTGGTTGTCCTTAGTGGGAGTGACCGAAGTGTTCTAGACGAGAATTTTGGTCAGTACAACATGTGGCTGGCAGCAGAAAACGGTATGTTCTTACGTCCTACGAAGGGAGAATGGATGACGACTATGCCCGAGAATTTACATATGGACTGGGTTGAGAGTGTTAAGCATGTTTTCGAGTATTTTACCGAAAGAACTCCTAGATCCCATTTCGAGCTTCGTGAAACTTCGCTGGTGTGGAATTACAAATATGCAGATGTTGAGTTTGGAAGACTTCAAGCGAGGGACTTGTTGCAGCATCTATGGACTGGTCCAATCTCAAATGCATCAGTTGATGTTGTCCAAGGCAGTCGATCAGTCGAGGTTCGAGCAGTTGGTGTTACAAAGGGTTCGGCCATTGATCGAATATTGGGAGAAATAGTTCGTGACAAAGGCATCAACAAGCCTATTGACTATGTTCTCTGTGTTGGGCACTTCCTAGCCAAGGATGAAGATGTGTATACATTTTTCGAGCCCGACCTTCCTTCTGAAGTGCCACAAACAGTCCCGAATCCTTTACCACCGCCGAAGATGCCAAACAATGGAGCACCGCCGAAGTCAGCACGCCTGAAGAAACAACGTTCCCTTTCCATTATAGAAAGAAGAGCAAACAGCCATGGGAGTGCAGTGTTTTGGAGGCCTGTAGTGCAGGATCGATTGTCACTGCATGAGGGTTCATCTGTTCTTGATCTCAAGGGTGACAATTACTTCTCGTGTGCCGTGGGGCGGAAGCGATCGAACGCAAGATACCTTCTTGTTTCGTCGAATGATGTTGTCAAACTTGTGAAGGAGTTGTCGGAATGTTTGGAGTCAAGTGTGAGTTGA 2769 43.48 MLSNNHNNSPPTPRTRLERLLRERELRRSNRSSLNEEAHSLGEFNSYDLFSFSGDSCGSFNEEDILEGVSVVKDIIDGFQRLEGRTSKQRLLVVANRLPVSAVRKGKETWHLEISVGGLVSALLGLKEFEARWIGWAGVNVPDEVGQRALEKALAEKKCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANKMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNRKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRIAAFPIGIDSDRFIRALKLPQVQDHIKELQERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPKWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAVLVNPWNITEVAASIGYALNMEADERERRHLHNFMHVTTHTSQEWAATFVSELNDTVVEAQIRTRQIPPLLPINEAANSYSRSHNRLVILGFNATLTEAVDALGRRCGQIRDMDLKVHPDVREPLKKLCDDRNTTVVVLSGSDRSVLDENFGQYNMWLAAENGMFLRPTKGEWMTTMPENLHMDWVESVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGSAIDRILGEIVRDKGINKPIDYVLCVGHFLAKDEDVYTFFEPDLPSEVPQTVPNPLPPPKMPNNGAPPKSARLKKQRSLSIIERRANSHGSAVFWRPVVQDRLSLHEGSSVLDLKGDNYFSCAVGRKRSNARYLLVSSNDVVKLVKELSECLESSVS 922
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2600958 2609496 + Carg14559-RA Car18g00415 166117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00415 922 Pfam Trehalose-phosphatase 614 813 IPR003337 GO:0003824|GO:0005992
Car18g00415 922 Coils Coil 17 37 - -
Car18g00415 922 MobiDBLite consensus disorder prediction 813 836 - -
Car18g00415 922 MobiDBLite consensus disorder prediction 813 830 - -
Car18g00415 922 Pfam Glycosyltransferase family 20 90 555 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00127 Car-Chr10:601967 Car18g00415 Car-Chr18:2600958 3.67E-132 dispersed
Car16g01107 Car-Chr16:9519005 Car18g00415 Car-Chr18:2600958 2.26E-134 dispersed
Car18g00415 Car-Chr18:2600958 Car11g00104 Car-Chr11:595269 6.78E-12 dispersed
Car01g01086 Car-Chr1:10183913 Car18g00415 Car-Chr18:2600958 0 wgd
Car18g00415 Car-Chr18:2600958 Car19g00792 Car-Chr19:8586811 1.35E-23 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00415 K16055 - csv:101213690 1665.2