Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00418 ATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAGCTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGTAAATCCGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGCGAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGACGATGCGAAGAAACTTGACAGACATGCGAAGAGCCGGTATACCGTTTGA 708 47.46 MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2620258 2623158 - Carg14556-RA Car18g00418 166120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00418 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 18 235 IPR001040 GO:0003723|GO:0003743|GO:0006413
Car18g00418 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 18 235 - -
Car18g00418 235 MobiDBLite consensus disorder prediction 1 36 - -
Car18g00418 235 SUPERFAMILY eIF4e-like 56 229 IPR023398 -
Car18g00418 235 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
Car18g00418 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Car18g00418 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 235 IPR023398 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00454 Car18g00418 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00939 Car-Chr8:6287030 Car18g00418 Car-Chr18:2620258 1.61E-75 dispersed
Car17g00127 Car-Chr17:774068 Car18g00418 Car-Chr18:2620258 9.43E-66 dispersed
Car14g00984 Car-Chr14:7154350 Car18g00418 Car-Chr18:2620258 3.02E-30 transposed
Car13g00454 Car-Chr13:6919246 Car18g00418 Car-Chr18:2620258 4.14E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00418 K03259 - csv:101206312 444.506