Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00466 ATGTTAGAAGAGCTCGCTCGAGGATCAGACGCGGAGTTAGGTTACGAAGCAGCTGTTAATTCGAATTCGAGTCAGAACTCTATGAGTAGTGAGAGTTGTAGTAGCTTCAGTCGTCTCTCGTTTGATGCTGCGGTTGATTTTCCTACCTCCCGATTCTCGCCGGGGAGTCTCGATTTGAAGCCTCATCGATCGTCTGATTTCGCTTACTCCGCCATTCGTCGACGGAAATCCAAGCTTACTTTCCGTGATTTTCGGCTTCTCCGTCGCATCGGCGCTGGCGACATTGGTACCGTTTATCTATGCCAGTTGCGGAAATTGACCGACGGTGGCTATGATGATGAAGACGACGATTCGTGTTTGTACGCGATGAAAGTGGTGGATAAAGAAGCGTTGGAATTGAAGAAGAAGGTGCAGAGGGCGGAAATGGAGAGAAAAATATTGAAGATGCTGGATCATCCGTTTTTGCCTACTCTTTACGCTGAGTTTGAGGCGTCTCATTTCTCTTGCATCGTCATGGAGTTCTGTTCCGGCGGTGATTTGCACTCTCTCCGCCATAAACAGCCGCGTAAACGCTTCTCTCTCAGCTCCGCAAGGTTTTATGCTGCTGAAGTTCTCGTTGCTTTAGAGTACCTTCACATGCTTGGAATCATCTACAGAGACCTTAAGCCGGAGAATGTCCTTGTCCGATCGGACGGTCACATCATGCTGTCGGATTTCGATCTATCTCTCTGCTCGGATGCCACTCCGGCTGTTGAATCGCCGGATTCCTCCCCAAATTCGGCATTCCCCGATGCGATGGCGTACCCCAAATCCAACACAACACCCACCGCCTCCGCCGCTACTACCAGCCCTTTTTCCTGCTTCTACAACCGGCTTTTCCGGTCACGCAAGGTCCAAACCCTGACTCCCAACTGGCTCTTCGTTGCCGAACCCGTCTCTGCTCGGTCCTGCTCCTTTGTCGGTACTCACGAGTATGTCTCGCCGGAAGTAGCCGCCGGCGGGTCACACGGCAACGCTGTTGACTGGTGGGCTTTTGGCGTATTTCTCTATGAGTTGATCTTCGGCCGGACGCCGTTTGCAGCTTCATCCAATGAGACAACGCTAAGAAACATCATAAAGAAGCCGTTGACGTTTCCGACCGCCGAGACCTCCGGCGCGCTTGAGCACCACGCGCGGGATCTAATATCCGGTTTGCTCAACAAGGACCCGACCCGGAGATTGGGTTCAAAACGCGGGTCTGCCGACATTAAGAAGCATCCATTCTTCAAAGGCCTTAACTTCGCCCTCATTCGGTCGCTCACGCCACCCGAGGTCCCCGGCGTACGACGGCGGAAGCCGGTTCCGGCGCCGGTGGCCAAATCCATGGACAAGGCAGCTGATTCGGGCGGGTTTGATTACTTCTGA 1404 53.13 MLEELARGSDAELGYEAAVNSNSSQNSMSSESCSSFSRLSFDAAVDFPTSRFSPGSLDLKPHRSSDFAYSAIRRRKSKLTFRDFRLLRRIGAGDIGTVYLCQLRKLTDGGYDDEDDDSCLYAMKVVDKEALELKKKVQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPRKRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDATPAVESPDSSPNSAFPDAMAYPKSNTTPTASAATTSPFSCFYNRLFRSRKVQTLTPNWLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWAFGVFLYELIFGRTPFAASSNETTLRNIIKKPLTFPTAETSGALEHHARDLISGLLNKDPTRRLGSKRGSADIKKHPFFKGLNFALIRSLTPPEVPGVRRRKPVPAPVAKSMDKAADSGGFDYF 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3054095 3056812 - Carg22563-RA Car18g00466 166168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00466 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Car18g00466 467 ProSiteProfiles Protein kinase domain profile. 84 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00466 467 Pfam Protein kinase domain 85 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00466 467 Pfam Protein kinase domain 316 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00466 467 Coils Coil 123 150 - -
Car18g00466 467 MobiDBLite consensus disorder prediction 439 467 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00395 Car18g00466 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00466 Car-Chr18:3054095 Car18g00579 Car-Chr18:6510796 1.00E-136 dispersed
Car13g00395 Car-Chr13:6510943 Car18g00466 Car-Chr18:3054095 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89522 PF00069 Pkinase 2.00E-32 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00466 - - csv:101208129 774.237