Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00473 ATGTCTCTTTCTCCCCTTTTCTTCTCTTCCTTTTCTTCTTCTTTCAATTTCTCTCCTTGGTCGCCGACGTCTTTTGCTTGCTTCCTCCTATATACTCTCTCTTTCACTTGGATCTGCATTTCATTTCCTGTCTTCGTTTTGGATCTGCATCTTGTTCTTGTTTTCACTGATTCACTACAACGGAAGAGCGGGGAGCTAAGTTGGAATTCGATCTTGGCTTGTTCTGAAATGGACAATGCTGATATTGAGAGCGGGGAAGAGGATTTTCATGGGCAGAGGGGAAGGAAATATCGCCCTGTTGAAGCCCATGATCGTGCTGTTCTTGAAATGTCTTCCATGGATCCGGGGCCCGCATCCTCTACGCCTTCCATTACCACGCGGCATCCTTCTATGAAGAAGGTAAAAGTGGGTTCTCAGACAGGCACTGATGGAAAAGAAGGGAACTCTCTTACTCTCGTCGAAATTAATGGCCCCCAGGGAGAATCCAAGCTGGAGTTTTTTGGTTTTGATTCTCTTGTCAATATTCTAGGCCTTAAGAGTATGATGGGGGAACAAATTCAAGCACCTTCTAGTCCTCGAGATGGTGAGAATGTTTCAATCTCTCAGGGGTTGCCAAAGAACGAGGAAGTCAAATCGGGAACATTGATGGGTGTATTTATCCCATGCTTACAGAACATATTGGGAATCATTTACTATATTCGATTTTCTTGGATTGTCGGCATGGCTGGGATTGGTGAGTCATTAGTGCTGGTGGCATTTTGTGGTTTATGTACGTTCTTGACTTCAATTTCACTGAGTGCTATTGCAACTAATGGTGCAATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTTCTCGGAAATGCAGTTGCTGGTGCTCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGGATGCTGTACCATCTGCAGGGATATTCAGAGAGACTGTAACAAAAGTTAATGGATCAACTGTTGAACCAATTCAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATCGTGACGATTTTTCTGTGCTTCATTGTGTTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTAGTTTGCATATTTCTTGGAATTTTTCTGGCCAAGAAAAACGATCCTGCAGATGGTGTCACAGGGTTGAGTATGGATACTTTTAAAGAAAATTGGAGTTCTGATTATCAGATGACTAACAGTGCTGGAATTCCCGATCCTCAGGGAAACGTATATTGGAATTTCAATGCATTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGATCTAATAGATCAGCTTCACTGAAGGATACTCAACGTTCAATTCCTATGGGAACATTGTTTGCGACTCTTTTGACAACTATATTGTATCTGGTCTCTGTGCTGTTGTTTGGAGCACTGGCAACCAGAAAGAGATTGTTAACAGATAGGCTTTTTACTGCTACAGTCGCGTGGCCTTTCCCAGCAATTATTTATGTTGGAATCATTTTATCAACCCTTGGAGCTGCTCTTCAGAGCTTGACAGGAGCCCCCCGCTTACTAGCAGCCATAGCCAATGATAATATATTACCCATTCTAAACTATTTTAAAGTAGAAGATGGCTGTGAGCCATACTTTGCAACCCTCTTTACTGCAATTCTCTGCATCGGATGTGTCATAATTGGGAATCTTGATCTTATCACACCAACCGTAACCATGTTTTTCCTATTGTGCTACGCTGGCGTGAACTTATCCTGCTTCCTTTTGGATCTACTAGATGCTCCCAGTTGGCGTCCACGATGGAAATTTCATCACTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCATGGTCATTCACGATAGTGTCTCTAGCCCTTGCAAGCCTTATATATTATTATGTGTGCCTTAGAGGTAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCGTATTTCCAACTTGCTCTCCGCAGCCTTCGTTCACTTGGAGCGAGCCAAGTTCACCCAAAGAATTGGTATCCCATACCGTTGATATTTTGCCGGCCATGGGGAAAGCTGCCAGAAAATGTTCCTTGTCACCCAAAACTTGCGGACTTTGCAAACTGCATGAAGAAAAAAGGCCGTGGAATGTCCATATTTGTGTCCATACTAGATGGAGACTACCATGAGCGGGTTGAAGATTCCAAAGCTGCCTGCAAACAGCTTGCTACATATATTGATTACAAACGTTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCCTCTATGTCTGAAGGCTTCAGGGGGATTGTTCAGACGATGGGTCTTGGCAATCTCAAGCCTAATATCATAGTTATGCGATATCCAGAAATCTGGCGTCGCGAAAATCTAACCGAGATTCCTGCTACTTTCGTTGGAATAATCAATGACTGCATTGATGCTAACAAGGCTGTTGTGATTGTTAAGGGTCTGGATGAATGGCCTAATGAATATCAGAGGCAGTATGGAACTATAGACTTGTATTGGATTGTGAGGGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTCACAAAGGAGAGCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATTGCTGAGGAGGATTCTGATGCCGAGGCCCTCAAAGCTGATGTCAAAAAGTTCTTGTATGATCTTCGGATGCAAGCCGAGGTGATCGTTATAACGATCAAATCATGGGACACCACACAAGTGGAGGGCGGGCAACAAGACGAATCAATCGAAGCGTTCACCGCTGGTCAAGGCAGGATTGCTAGTTATTTAGGTGAAATGAAGGCAGCTGCTGCTGAAAGCAGAGCAACCACACTAATGGCTGATGGGAAGCCTGTGAATGTGAATGAGAAACAAGTACAGAAATTTCTAAACACAACTCTCAAGTTGAACTCGAGCATTCTGAGATACTCGAGGATGGCTGCGGTCGTGCTCGTCAGCCTCCCGCCACCTCCGCCCAACCATCCTGCCTACTTCTATATGGAGTACTTGGACTTGTTGGTTGAGAATGTGCCGAGGCTATTGATCGTAAGAGGATATCGTAGAGACGTCGTAACGTTGTACACGTAG 3180 44.28 MSLSPLFFSSFSSSFNFSPWSPTSFACFLLYTLSFTWICISFPVFVLDLHLVLVFTDSLQRKSGELSWNSILACSEMDNADIESGEEDFHGQRGRKYRPVEAHDRAVLEMSSMDPGPASSTPSITTRHPSMKKVKVGSQTGTDGKEGNSLTLVEINGPQGESKLEFFGFDSLVNILGLKSMMGEQIQAPSSPRDGENVSISQGLPKNEEVKSGTLMGVFIPCLQNILGIIYYIRFSWIVGMAGIGESLVLVAFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLDAVPSAGIFRETVTKVNGSTVEPIQSPSSHDLQVYGIIVTIFLCFIVFGGVKMINRVAPAFLIPVLFSVVCIFLGIFLAKKNDPADGVTGLSMDTFKENWSSDYQMTNSAGIPDPQGNVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPMGTLFATLLTTILYLVSVLLFGALATRKRLLTDRLFTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDNILPILNYFKVEDGCEPYFATLFTAILCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDSKAACKQLATYIDYKRCEGVAEIVVAPSMSEGFRGIVQTMGLGNLKPNIIVMRYPEIWRRENLTEIPATFVGIINDCIDANKAVVIVKGLDEWPNEYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAEALKADVKKFLYDLRMQAEVIVITIKSWDTTQVEGGQQDESIEAFTAGQGRIASYLGEMKAAAAESRATTLMADGKPVNVNEKQVQKFLNTTLKLNSSILRYSRMAAVVLVSLPPPPPNHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLYT 1059
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3127310 3140943 + Carg22571-RA Car18g00473 166175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00473 1059 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 88 1058 - -
Car18g00473 1059 TIGRFAM 2a30: K-Cl cotransporter 154 1059 IPR004842 GO:0006811|GO:0015377|GO:0016021
Car18g00473 1059 MobiDBLite consensus disorder prediction 114 149 - -
Car18g00473 1059 MobiDBLite consensus disorder prediction 111 149 - -
Car18g00473 1059 Pfam Amino acid permease 217 692 IPR004841 GO:0016020|GO:0055085
Car18g00473 1059 Pfam Solute carrier family 12 726 847 IPR018491 GO:0006811|GO:0016020|GO:0022857
Car18g00473 1059 Pfam Solute carrier family 12 858 1058 IPR018491 GO:0006811|GO:0016020|GO:0022857
Car18g00473 1059 Gene3D Amino acid/polyamine transporter I 210 674 - -
Car18g00473 1059 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 88 1058 IPR004842 GO:0006811|GO:0015377|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00388 Car18g00473 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00388 Car-Chr13:6464500 Car18g00473 Car-Chr18:3127310 9.11E-66 transposed
Car13g00387 Car-Chr13:6403144 Car18g00473 Car-Chr18:3127310 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00473 K14427 - csv:101216218 1780.38