Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00527 ATGTACAGAAAAACAGTAAAGGGTAGCCATAGAATGATGGAGTTTCGTTCAATTTTGATAGCAAGTTTAGTTCTTGTGTATTGCTTTGCAGAAGAGAGGCAAATATACTTAGTTTTAATGGAAGAAAGCTCAAACGAAGACCATCTTCTTCAAAACACACTAAAAAGCTACACAAAGCTTCAAAGCTTCAAGCACATAATGAATGGCTTTGCAGTGCACACAACGCCATCGGAGGCCGCCAAGCTAAGACAAGCCAATGGAGTGAAATTAGTGGAGAGAGATAGAGGAGTGAGAAAGATGACAACTTATACCCCTAAGTTTCTAGGGGTGCCCTCCAAATCAAGGGTATGTTCCAAGAAGACTAAAACTAGCCCTGATGGGGAAGGGATTGTTATTGGGTTTGTGGACTCTGGGATTGACCCAACACACCCAAGCTTTGGTTTTGATGATGGTTATGAAGATTTGAGTCTGTTTTGTGAAAAGGGTCGGTTTTTTCCATTGAGTTCGTGCAATGGGAAGATAGTTGGGGCTAGAATTGCTGTTTATAAGGCAGTTTATCCAACAATGTCCACTCTAACAGATGTAGTTTCAGCAATAGATCAAGCAGTGATCGATGGAGTTGATATATTGGCATTATCGGTCGGACCAAATGAACCACCCGAAGAAGGACTTACCTTCCTAAGCATATACGACATTGCCATATTATCTGCTACGCGAGCTGGGATCCTTGTGGTTCAGGCAGTCGGAAACAACGGCCCAGCCCCAGCAACCGTTGTCTCGTACAGCCCATGGTCGGTCGGCGTTGCAGCTTCAGGCACTGACAGAGTTTATCCGGCCTCACTTCTTCTTGGCAATGGCCAGAAAGTTGGAGGAGTAGGATTATCTGGACCCACTTTTTTTCTACATAAACTGGTATTAGCCAAGGATGCAATGAACCAAAATGGGACAATGCCCAGTGAAGAGTGCCAATATCCTGAAGCTTTTGACCCAAATCTTGTCCAAAACAGCATAGTCCTCTGCTCTTTCTCTCAAGGATTCCTCAATGGCACCTCCTCCCTCGCAGCCATCATCCACACTGCAACGACACTCCGATTCATCGGGTTCGCTCTCATTGCAAATCCTAACTACGGCGATTTCATCGCTGAGCCCATCCCTTTCGGACTTCCTGGCATTCTCATCCCGAACGCATCAGATTCCCAGGCGATACTGAAGTACTACGAAGCAAATACATGCAAGGATGACAATGGAATGGTCAGTGAATTTAAAGGGAAAGCAGCTATAGGAGAAGGAAGAGTTGCTTCATTTGGAAGCCAAGCACCAACAGTGAGCAGATTTTCATCCAGAGGCCCAGATTATATGAACATGAACAGGACAGTAGCTGATGTGCTAAAGCCAGATATTCTTGCACCTGGCCACCAAATTTGGGCTGCTTGGAGCCCTCTCAGTGTCACAGAGCCACTTTTGAAGGGTTACCAATTTGCACTGATGTCTGGAACAAGTATGGCAGCACCTCATATAGTGGGAATAGCAGCACTTATTAAGCAAAAGAATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCAATGTCAACAACTGCCACAAAGTATGATATGAATGGAGACCTTATTCAGGCTGAGGGATTCAACATTCATCGTTTATATCCTTCTACTCCCTTTGATTTGGGCGCTGGCCTTGTCAAACCGACCAACGCTTTGGATCCAGGACTGGTCTTCCCAGCAGAATATGAAGACTACATAAACTTCTTGTGCTCATTACCTGGGGATCCTGCTGTCATAAAAAATACCACTGGAGGACAGTGCAACGCCTCTGAACCACAGCCACACCCTGCAGATCTGAACCTTCCTTCAGTCACAATATCATCACTGGTTGGGCATCAGGTGCTGCACAGAAGAGTGAAGAATGTAGGAACCAAAGTGGAGACATACGTGTGGTCAGTGATCCCACCAAATGGGACAACAATCAACATCAATCCACCATGGTTCACCATAGCACCAGGAGGACTCCAAAACTTGGAAATACAGATCAAAGTTACACAAAAAATGAATCACTTTACCTTTGGGGAGATTATTTTCACAGGAAGTTTAAACCATATTGGAAGGATCCCTTTGTCAGTTTTGGCTGTTTCTGTATCCTAA 2157 44.83 MYRKTVKGSHRMMEFRSILIASLVLVYCFAEERQIYLVLMEESSNEDHLLQNTLKSYTKLQSFKHIMNGFAVHTTPSEAAKLRQANGVKLVERDRGVRKMTTYTPKFLGVPSKSRVCSKKTKTSPDGEGIVIGFVDSGIDPTHPSFGFDDGYEDLSLFCEKGRFFPLSSCNGKIVGARIAVYKAVYPTMSTLTDVVSAIDQAVIDGVDILALSVGPNEPPEEGLTFLSIYDIAILSATRAGILVVQAVGNNGPAPATVVSYSPWSVGVAASGTDRVYPASLLLGNGQKVGGVGLSGPTFFLHKLVLAKDAMNQNGTMPSEECQYPEAFDPNLVQNSIVLCSFSQGFLNGTSSLAAIIHTATTLRFIGFALIANPNYGDFIAEPIPFGLPGILIPNASDSQAILKYYEANTCKDDNGMVSEFKGKAAIGEGRVASFGSQAPTVSRFSSRGPDYMNMNRTVADVLKPDILAPGHQIWAAWSPLSVTEPLLKGYQFALMSGTSMAAPHIVGIAALIKQKNPSWTPSMIASAMSTTATKYDMNGDLIQAEGFNIHRLYPSTPFDLGAGLVKPTNALDPGLVFPAEYEDYINFLCSLPGDPAVIKNTTGGQCNASEPQPHPADLNLPSVTISSLVGHQVLHRRVKNVGTKVETYVWSVIPPNGTTININPPWFTIAPGGLQNLEIQIKVTQKMNHFTFGEIIFTGSLNHIGRIPLSVLAVSVS 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4143100 4153055 - Carg27281-RA Car18g00527 166229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00527 718 Pfam Fibronectin type-III domain 618 712 IPR041469 -
Car18g00527 718 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 132 143 IPR023827 -
Car18g00527 718 Pfam Subtilase family 171 537 IPR000209 GO:0006508|GO:0008236
Car18g00527 718 ProSiteProfiles Serine proteases, subtilase domain profile. 105 572 - -
Car18g00527 718 ProSitePatterns Serine proteases, subtilase family, serine active site. 498 508 IPR023828 -
Car18g00527 718 Pfam Peptidase inhibitor I9 49 98 IPR010259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01332 Car18g00527 CCT
Car07g00037 Car18g00527 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00527 Car-Chr18:4143100 Car16g00018 Car-Chr16:203184 3.68E-61 dispersed
Car18g00527 Car-Chr18:4143100 Car05g00664 Car-Chr5:4131628 2.88E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00527 - - mcha:111012715 925.62