Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00637 ATGAGTGGCATGAATCAACAACATCCCACCAAAAAAAGGCTCATGCCAATCTCACCCTCAGTAGCTCTACAAATTTCTCATCCACAAAGCATGATACAAGCTTTCTCAGCTCCTCCTTTAAGAAGAGGGAGACGCCCGTCGATGTCTGCAGCAAACAACAACTCCGCCATGGCTACTTGCATTCGGGATTCAGTCGAAGACGAGGAACACATTTTCCGTAGCCAACTTCCCGAGGTCCAAGTGCCTGATGATATCACATTGCCAGAGTTTGTACTTCAGAATGCTGAATCATATGCTGATAATGTGGCATTTGTGGAAGCTGTGAGCGGAAAGGCGTACACTTATCGTGAAGTTGTGAGAGACACGAGTAGGTTCGCTAAGGCCTTAAGCTCTCTGAGGTTGAAGAAGGGGCAGGTCGTTATTGTCGTTCTACCCAACGTTGCTGAATATGCCATTGTTGCTTTAGGGATAATGGCTGCTGGAGGTGTGTTTTCTGGTGTGAATCCAGCAGCTCACATATCCGAAATCAAAAAGCAGGTGGAGGTAGCAGACGCCAAACTCGTCGTTACAAACAGCTCAAGCTTTGAAAAGGTGAAGGAATTAAAGCTTCCAGTGATCGTAGTAGGGGAGGAACTGATTGAAGGTTCCATGAACTGGCACCAACTGCTCGAAGCTGCGGACCGCGCGGGCAACAATTTCGTCAAAGAAGATATCAAGCAGACTGATTTATGTGCCCTTCCTTTCTCATCAGGCACTACAGGAGTTTCCAAAGGTGTAATGCTAACTCATCGAAATCTAGTGGCAAACTTGTGTTCTACGCTCTCCGGCGTACCGCAAGAAATGGTGGGCAAGGTCACGACGTTAGGCCTCATCCCGTTCTTCCACATTTACGGGATTACCGGAATATGTTGTGCCACACTTCGAAACAAGGGAAAAGTTGTGGTGATGGGAAGATTTGATCTTAGAACCTTCATCAATGCCCTGATAACACAGGAGGTCACATTTGCTCCAATTGTTCCTCCTATCATCTTGGCCTTGGTTAAGAATCCTATTGTGAAGGAATTCGATCTAAGCGGTCTCAAACTTCAGGCTATCATGACTGCAGCTGCTCCGCTCGCACCCGAACTTCAAACGTCCTTTGAGAAAAAGTTCCCGGGCGTGGATGTTCAAGAGGCATATGGGCTAACCGAGCATAGCTGCATCACTCTCAACTATGGAAGCATAGGCAAAGACAATCTCGCTGCAAAGAAAAACACGGTTGGCCGTATTCTTCCTAATCTAGAAGTCAAATTCATCGACCCCGACAGCGGTAGGTCGCTGCCGAAGAACACACCTGGGGAAATCTGTGTAAGAAGCCAGTGTGTGATGCAAGGCTACTACAATAATGAAGAGGAGACTTCAAGGACCATCGACGACAAAGGCTGGATGCACACGGGCGACATCGGATACATCGACGACGATGGCGATGTGTTTATTGTGGATCGTATTAAAGAGTTGATTAAGTACAAAGGCTTTCAAGTAGCTCCGGCCGAGTTAGAGGCAATCCTCCTTACTCATCCCTCGATTGAAGATGCAGCTGTGGTGCCGCTGCCAGACAAAGAAGCCGGTGAGATCCCAGCAGCAAGCATTGTAATGACTCCAAATGCAAAAGAAACCGAAGACGAAATAATCAAATACGTCGCCTCAAACGTTGCACATTACAAGAAAGTTAGGCTCGTTCATTTTGTCGAAACGATCCCGAAATCGCCGTCTGGGAAAGTCATGAGGAGGTTGATCAAAGAGAAGATGATCGAAAAGATTCGAGCCGAGACGGCCTCTTGA 1821 47.28 MSGMNQQHPTKKRLMPISPSVALQISHPQSMIQAFSAPPLRRGRRPSMSAANNNSAMATCIRDSVEDEEHIFRSQLPEVQVPDDITLPEFVLQNAESYADNVAFVEAVSGKAYTYREVVRDTSRFAKALSSLRLKKGQVVIVVLPNVAEYAIVALGIMAAGGVFSGVNPAAHISEIKKQVEVADAKLVVTNSSSFEKVKELKLPVIVVGEELIEGSMNWHQLLEAADRAGNNFVKEDIKQTDLCALPFSSGTTGVSKGVMLTHRNLVANLCSTLSGVPQEMVGKVTTLGLIPFFHIYGITGICCATLRNKGKVVVMGRFDLRTFINALITQEVTFAPIVPPIILALVKNPIVKEFDLSGLKLQAIMTAAAPLAPELQTSFEKKFPGVDVQEAYGLTEHSCITLNYGSIGKDNLAAKKNTVGRILPNLEVKFIDPDSGRSLPKNTPGEICVRSQCVMQGYYNNEEETSRTIDDKGWMHTGDIGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLTHPSIEDAAVVPLPDKEAGEIPAASIVMTPNAKETEDEIIKYVASNVAHYKKVRLVHFVETIPKSPSGKVMRRLIKEKMIEKIRAETAS 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7678813 7681426 + Carg21220-RA Car18g00637 166339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00637 606 Pfam AMP-binding enzyme 93 502 IPR000873 -
Car18g00637 606 Pfam AMP-binding enzyme C-terminal domain 511 586 IPR025110 -
Car18g00637 606 ProSitePatterns Putative AMP-binding domain signature. 246 257 IPR020845 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00611 Car-Chr5:3625899 Car18g00637 Car-Chr18:7678813 8.70E-104 dispersed
Car18g00637 Car-Chr18:7678813 Car19g00158 Car-Chr19:1448505 7.87E-102 dispersed
Car18g00637 Car-Chr18:7678813 Car01g01572 Car-Chr1:13071467 8.42E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00637 K01904 - csv:101220731 1012.68