Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car18g00644 | ATGTTAGGCGCTGCCGGAATTTTCATACCGGAATTCTTGACAAAGATCGGAATTTTGAACACTCCATCATGGTACACCGCCGGAGAATTGGAATACTTCACCGACACCACCACCCTCTTCGTCGTCGAACTCATTTTCATCGGTTGGGCCGAGGGTAGACGGTGGGCCGACATTCTCAAACCCGGCTGCGTCAACACCGACCCGATCTTCCCCAACAACAAGCTCACCGGAACGGACGTTGGGTACCCAGGAGGGCTGTGGTTCGACCCGCTCGGATGGGGTAGCGGGTCACCCGAAAAGATCAAGGAGTTGAGAACTAAAGAGATCAAGAACGGTCGATTGGCTATGTTGGCAGTGATGGGTGCATGGTTTCAACACATTTACACCGGCACCGGTCCCATCGACAATCTTTTCGCGCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGCTTTTACTCCCAAGTGA | 471 | 54.56 | MLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK | 156 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 7714155 | 7715980 | - | Carg21227-RA | Car18g00644 | 166346 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car18g00644 | 156 | Pfam | Chlorophyll A-B binding protein | 1 | 126 | IPR022796 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car03g01249 | Car-Chr3:9642401 | Car18g00644 | Car-Chr18:7714155 | 2.19E-110 | dispersed | |
| Car11g00625 | Car-Chr11:3410039 | Car18g00644 | Car-Chr18:7714155 | 2.38E-64 | dispersed | |
| Car18g00644 | Car-Chr18:7714155 | Car01g00733 | Car-Chr1:4473173 | 3.23E-41 | dispersed | |
| Car18g00644 | Car-Chr18:7714155 | Car10g00187 | Car-Chr10:901163 | 1.74E-49 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car18g00644 | K08908 | - | csv:101214055 | 332.798 |